RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 GPR32P1Q8NGA4 272 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10W1Q8NGF6 305 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR4C13Q8NGP0 309 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR51Q1Q8NH59 317 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 C16orf52Q8NHV5 167 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PIK3IP1Q96FE7 263 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 RILPQ96NA2 401 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF300Q96RE9 604 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 NODALQ96S42 347 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 RPF2Q9H7B2 306 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 CALYQ9NYX4 217 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 GLTPQ9NZD2 209 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM216Q9P0N5 145 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 C14orf166Q9Y224 244 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 NDUFAF1Q9Y375 327 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 U3KQA8 63 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 EML5Q05BV3 1969 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OTOGLQ3ZCN5 2332 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 UNC13CQ8NB66 2214 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZFHX2Q9C0A1 2572 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 DAPL1A0PJW8 107 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 CEACAM18A8MTB9 384 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 GALR3O60755 368 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 FOXH1O75593 365 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 DCTN3O75935 186 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SHBGP04278 402 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SEMG1P04279 462 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 EIF4EP06730 217 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 GUSBP08236 651 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 IFI6P09912 130 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 IDO1P14902 403 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 AKR1C4P17516 323 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 HIST1H1TP22492 207 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PPIBP23284 216 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ERVK-16P61578 105 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ARG2P78540 354 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 C16orf72Q14CZ0 275 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PON3Q15166 354 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR1Q1Q15612 314 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 UBE2UQ5VVX9 321 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM42Q69YG0 159 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF324BQ6AW86 544 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 TRPT1Q86TN4 253 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZADH2Q8N4Q0 377 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 LINC01555Q8NAE3 123 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 MORN4Q8NDC4 146 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR4F15Q8NGB8 312 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PIFOQ8TCI5 191 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 CHCHD10Q8WYQ3 142 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 DDB2Q92466 427 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10C1Q96KK4 312 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF285Q96NJ3 590 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 SRXN1Q9BYN0 137 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 DDX31Q9H8H2 851 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 EXOSC4Q9NPD3 245 aaKnown RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF71Q9NQZ8 489 aaPredicted RBP4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PRTFDC1Q9NRG1 225 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 VPREB3Q9UKI3 123 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PCTPQ9UKL6 214 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 V9GY05 133 aa4.11□□□□□ -1.75
VPS35P1-201ENST00000563400 PCDH15Q96QU1 1955 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 ASCC3Q8N3C0 2202 aaKnown RBP4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 TNRC6BQ9UPQ9 1833 aaKnown RBP4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 PIKFYVEQ9Y2I7 2098 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 SAA2-SAA4A0A096LPE2 208 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 TRGV8A0A0C4DH27 118 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 A0A1W2PS18 150 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 C15orf61A6NNL5 157 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 TP53I11O14683 189 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 SPAG7O75391 227 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 ZFAND5O76080 213 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 WISP3O95389 354 aaPredicted RBP4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 NUDT3O95989 172 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHG1P01857 330 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 CCL4P13236 92 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 PAX1P15863 534 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 EMX2Q04743 252 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 CD300CQ08708 224 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 SMAGPQ0VAQ4 97 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 KIAA1644Q3SXP7 199 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 DEFB134Q4QY38 66 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 OPN5Q6U736 354 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 Q6ZRP5 223 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM144Q7Z5S9 345 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 LRRTM1Q86UE6 522 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 APLFQ8IW19 511 aaPredicted RBP4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 SLC30A8Q8IWU4 369 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 OR13A1Q8NGR1 328 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10Z1Q8NGY1 313 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 MS4A6EQ96DS6 147 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 DHRS9Q9BPW9 319 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 MS4A8Q9BY19 250 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 DEFB126Q9BYW3 111 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 DPY30Q9C005 99 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 OR51I1Q9H343 314 aa4.1□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms