RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 HPNP05981 417 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 IL11P20809 199 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ECI1P42126 302 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 RTP5Q14D33 572 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ABCA11PQ4W5N1 156 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 VHLLQ6RSH7 139 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 STPG4Q8N801 248 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 Q9N2K0 584 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF823P16415 610 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF20P17024 532 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 ANKRD37Q7Z713 158 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 KMT5CQ86Y97 462 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 TECTBQ96PL2 329 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 GPER1Q99527 375 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 RBKSQ9H477 322 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 PRSS50Q9UI38 385 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 RARRES3Q9UL19 164 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
GTF3C1-203ENST00000562609 KNTC1P50748 2209 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TNFSF12O43508 249 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 IGHEP01854 428 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 DYNLT3P51808 116 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 RPL27P61353 136 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 RANP62826 216 aaKnown RBP12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TEX43Q6ZNM6 134 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 AGBL5Q8NDL9 886 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 OR5G3P0C626 314 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 GP1BBP13224 206 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 LIAT1Q6ZQX7 453 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 GRINAQ7Z429 371 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF441Q8N8Z8 693 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 LIME1Q9H400 295 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 EML6Q6ZMW3 1958 aa12.11□□□□□ -0.47
GTF3C1-203ENST00000562609 TMED7-TICAM2A0A0A6YYA0 188 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 CCDC163A0A0D9SF12 145 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 HRASP01112 189 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM225BP0DP42 221 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 PGCP20142 388 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 CARD18P57730 90 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 BSXQ3C1V8 233 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 TPTE2P1Q5T6R2 138 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 NUP54Q7Z3B4 507 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 CALHM1Q8IU99 346 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 TMEM252Q8N6L7 170 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 MAGT1Q9H0U3 335 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 PLEKHF2Q9H8W4 249 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 NAT8Q9UHE5 227 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 A0A1W2PN81 502 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 YPEL1O60688 119 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 HLA-DOBP13765 273 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 CHRNA7P36544 502 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 FXYD4P59646 89 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 COMMD2Q86X83 199 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 OR4D5Q8NGN0 318 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 OR2T10Q8NGZ9 312 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 RASL10BQ96S79 203 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 NXT1Q9UKK6 140 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 RNF115Q9Y4L5 304 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 SSSCA1O60232 199 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 LILRA1O75019 489 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ZNF728P0DKX0 622 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 MEX3BQ6ZN04 569 aaKnown RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 Q6ZVH6 145 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 OR5AS1Q8N127 324 aa12.1□□□□□ -0.47
GTF3C1-203ENST00000562609 IFI44Q8TCB0 444 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms