RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CCRL2O00421 344 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GEMIN2O14893 280 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR7C1O76099 320 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LIMS3P0CW19 117 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LIMS4P0CW20 117 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RBM11P57052 281 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 Q8N9W7 124 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 UBALD1Q8TB05 177 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 APH1BQ8WW43 257 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RAX2Q96IS3 184 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 Q96MT0 163 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 MRPS18AQ9NVS2 196 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 IL36GQ9NZH8 169 aa13.13□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 MPZL2O60487 215 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GAPDHP04406 335 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GZMHP20718 246 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GPR12P47775 334 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TGIF2LXQ8IUE1 241 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR52N1Q8NH53 320 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 METTL9Q9H1A3 318 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TMEM30CPA0ZSE6 113 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 AP4M1O00189 453 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SERPINA2P20848 420 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ZNF93P35789 620 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ZFP1Q6P2D0 407 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RPL22L1Q6P5R6 122 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LINC00311Q8N616 119 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TFAP2CQ92754 450 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ORAI1Q96D31 301 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 WWC2-AS2Q96NR7 200 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SLC29A1Q99808 456 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 PLSCR3Q9NRY6 295 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 GFOD1Q9NXC2 390 aa13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RPL36Q9Y3U8 105 aaKnown RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SIRT4Q9Y6E7 314 aaPredicted RBP13.11□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 IGHV3-43A0A0B4J1X8 118 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 A0A1W2PP11 408 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CCL24O00175 119 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CSTBP04080 98 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CD2P06729 351 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 IGHV3-43DP0DP04 118 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ETV1P50549 477 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LUMP51884 338 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RAB25P57735 213 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 DGCR2P98153 550 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CCDC58Q4VC31 144 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 KLHL22Q53GT1 634 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR2G6Q5TZ20 316 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 LINC00596Q86U02 117 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 C8orf31Q8N9H6 132 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 FGF20Q9NP95 211 aaPredicted RBP13.1□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 MAGEA13PA6NCF6 341 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 SLC31A2O15432 143 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ORC5O43913 435 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 PPP3R1P63098 170 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 CFHR3Q02985 330 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 PNLIPRP3Q17RR3 467 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 MPV17LQ2QL34 196 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 ATAD3CQ5T2N8 411 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 RNF152Q8N8N0 203 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 HSPB9Q9BQS6 159 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 C9orf16Q9BUW7 83 aa13.09□□□□□ -0.31
VPS9D1-AS1-201ENST00000562298 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 MOSP00540 346 aa13.08□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 MT-ND4P03905 459 aa13.08□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 IGFBP3P17936 291 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 CD1BP29016 333 aa13.08□□□□□ -0.32
VPS9D1-AS1-201ENST00000562298 BDKRB2P30411 391 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms