RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 VCYO14598 125 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 GPR42O15529 346 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 EFNA2O43921 213 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PRKNO60260 465 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 OR1I1O60431 355 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PRAMEF10O60809 474 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 CATP04040 527 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 SDC1P18827 310 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TCN2P20062 427 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TNFRSF1BP20333 461 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PPIBP23284 216 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 NPY1RP25929 384 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TNFSF8P32971 234 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 RPL4P36578 427 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PGFP49763 221 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 LOXL3P58215 753 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 HILS1P60008 231 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PFN3P60673 137 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 DEFA5Q01523 94 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 RUNX3Q13761 415 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 FZD2Q14332 565 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 PMVKQ15126 192 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 ZNF79Q15937 498 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 SSX1Q16384 188 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 IAH1Q2TAA2 248 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 C1orf195Q5TG92 126 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 C1QL3Q5VWW1 255 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TEX36Q5VZQ5 186 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 B3GNTL1Q67FW5 361 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 RPL22L1Q6P5R6 122 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TRIM40Q6P9F5 258 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 ANKRD37Q7Z713 158 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 BMPERQ8N8U9 685 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 LOXL4Q96JB6 756 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 MCTS1Q9ULC4 181 aaKnown RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
CAPN3-211ENST00000562199 SPIN1Q9Y657 262 aaPredicted RBP4.68□□□□□ -1.66
CAPN3-211ENST00000562199 TRAV36DV7A0A075B6V5 113 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 TRAV18A0A075B6X5 111 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 IGHV2OR16-5A0A0B4J2B6 119 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 LRIT2A6NDA9 550 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 B4DXG7 233 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 LOC730098B7Z3J9 87 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ZNF814B7Z6K7 855 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ZNF670-ZNF695F2Z2N8 137 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 H3BMH7 237 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 PHOX2AO14813 284 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 CRXO43186 299 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ATP5LO75964 103 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 AGFG2O95081 481 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 C1orf105O95561 183 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 CA1P00915 261 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 GCGP01275 180 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 GASTP01350 101 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 HLA-DQB1P01920 261 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 MT-ND4LP03901 98 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ACP2P11117 423 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RPL35AP18077 110 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SRIP30626 198 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 TSFMP43897 325 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 GPR6P46095 362 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 MEOX1P50221 254 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 PDX1P52945 283 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 EIF5AP63241 154 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 MRPS6P82932 125 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 HIST1H1AQ02539 215 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 TGFBR3Q03167 851 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SRYQ05066 204 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 CRHR2Q13324 411 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 DCST2Q5T1A1 773 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 DMKNQ6E0U4 476 aaPredicted RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RTL6Q6ICC9 239 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SFXN4Q6P4A7 337 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SPSB3Q6PJ21 355 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ARL9Q6T311 187 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 TMEM184AQ6ZMB5 413 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SLC25A48Q6ZT89 311 aaKnown RBP4.67□□□□□ -1.66
CAPN3-211ENST00000562199 TRIM48Q8IWZ4 208 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 OR2L13Q8N349 312 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 PNKDQ8N490 385 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 YIPF7Q8N8F6 280 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 OR10AD1Q8NGE0 317 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 OR10D4PQ8NGN7 298 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 OR2T4Q8NH00 348 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 OR5K2Q8NHB8 316 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RDH5Q92781 318 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 UBE2E3Q969T4 207 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RNF183Q96D59 192 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RSPRY1Q96DX4 576 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SIGLEC12Q96PQ1 595 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 GABRG3Q99928 467 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 VN1R3Q9BXE9 311 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 SMIM3Q9BZL3 60 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 ZBP1Q9H171 429 aa4.67□□□□□ -1.66
CAPN3-211ENST00000562199 RNF121Q9H920 327 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms