RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 C10orf99Q6UWK7 81 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 IZUMO2Q6UXV1 221 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 CEACAM19Q7Z692 300 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 DRAM1Q8N682 238 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 Q8NFD4 153 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 MYDGFQ969H8 173 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 TOMM40LQ969M1 308 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 RPEQ96AT9 228 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 CNBD2Q96M20 576 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 CITED2Q99967 270 aaPredicted RBP7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 MND1Q9BWT6 205 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 MMP28Q9H239 520 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 MMP27Q9H306 513 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 RANBP3Q9H6Z4 567 aaPredicted RBP7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 ETAA1Q9NY74 926 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 IL36GQ9NZH8 169 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 TRAPPC2LQ9UL33 140 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 PEX16Q9Y5Y5 336 aa7.58□□□□□ -1.2
NSMCE1-203ENST00000562039 FAM90A22PA8MWA6 464 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 MCRIP1C9JLW8 97 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 LY6LH3BQJ8 138 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 SLC31A2O15432 143 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 FBXO24O75426 580 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 MT-ND4P03905 459 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 BRS3P32247 399 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 C2orf68Q2NKX9 166 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 MPV17LQ2QL34 196 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 LIAT1Q6ZQX7 453 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 MOB3BQ86TA1 216 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 LRRTM1Q86UE6 522 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 OR10X1Q8NGY0 326 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 OR1L1Q8NH94 360 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 LINC00527Q9UJ94 153 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 LSM2Q9Y333 95 aaKnown RBP7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
NSMCE1-203ENST00000562039 VWFP04275 2813 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 A0A087X0M5 115 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 A0A1B0GX30 115 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 A0A1W2PPI3 338 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 C12orf77C9JDV5 145 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 NPIPB11E5RHQ5 1161 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 G3V4G9 280 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 H0YHG0 523 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 C15orf65H3BRN8 121 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 RGS10O43665 173 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 ZNF780AO75290 641 aaPredicted RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 PRB2P02812 416 aaPredicted RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 RCC1P18754 421 aaPredicted RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 MYF6P23409 242 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 CEACAM3P40198 252 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 MNDAP41218 407 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 KCNJ3P48549 501 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 DYNLT3P51808 116 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 SLC35A2P78381 396 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 GPR50Q13585 617 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 IRF3Q14653 427 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 P2RY14Q15391 338 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 HSD17B12Q53GQ0 312 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 NHLRC3Q5JS37 347 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 KHDC1LQ5JSQ8 128 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 SYT6Q5T7P8 510 aaPredicted RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 SIGIRRQ6IA17 410 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 UNQ9370/PRO34162Q6UXP9 181 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 ZNF497Q6ZNH5 498 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 LYPD6Q86Y78 171 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 OR52L2PQ8NGH6 319 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 UFD1Q92890 307 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 OCSTAMPQ9BR26 566 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 NICN1Q9BSH3 213 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 TPRKBQ9Y3C4 175 aa7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 AK6Q9Y3D8 172 aaKnown RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 AMMECR1Q9Y4X0 333 aaPredicted RBP7.56□□□□□ -1.2
NSMCE1-203ENST00000562039 NOTCH3Q9UM47 2321 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 ZNF736B4DX44 427 aaPredicted RBP7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 CCRL2O00421 344 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 HSD17B6O14756 317 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 IGKV1D-33P01593 117 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 IGKV1-33P01594 117 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 HBZP02008 142 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 AMY1AP04745 511 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 AMY2AP04746 511 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 TMEM11P17152 192 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 MAPK3P27361 379 aaPredicted RBP7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 CLDN12P56749 244 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 MADCAM1Q13477 382 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 GPR176Q14439 515 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 GNMTQ14749 295 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 Q8N2B8 174 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 OR5AU1Q8NGC0 362 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 SETD6Q8TBK2 473 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 CFHR4Q92496 578 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 R3HDM4Q96D70 268 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 Q96M66 194 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 RBM14Q96PK6 669 aaKnown RBP7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 SULT4A1Q9BR01 284 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 FAAP24Q9BTP7 215 aa7.55□□□□□ -1.2
NSMCE1-203ENST00000562039 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms