RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 RPRMQ9NS64 109 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 H0Y980 276 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 SERPINE2P07093 398 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 BCL2P10415 239 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 GPM6AP51674 278 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 RPS19BP1Q86WX3 136 aaKnown RBP11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 OR56B2PQ8NGI1 322 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 PRO1933Q9H354 126 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 A0A0G2JRQ6 117 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 CNOT4O95628 575 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 NAPSAO96009 420 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 CYB5R3P00387 301 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 MDKP21741 143 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 Q6ZS49 121 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 DNASE2BQ8WZ79 361 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 GPR146Q96CH1 333 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 C14orf144Q96I85 54 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 SNX22Q96L94 193 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 RBM14Q96PK6 669 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 CABLES2Q9BTV7 478 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 UFSP2Q9NUQ7 469 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 CISD1Q9NZ45 108 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 TRAV1-1A0A0B4J248 108 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 IGKV1-6A0A0C4DH72 117 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A8PA6NJQ4 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNF716A6NP11 495 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 PGA5P0DJD9 388 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 M1APQ8TC57 530 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 IMMP1LQ96LU5 166 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 VSIRQ9H7M9 311 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 GPR35Q9HC97 309 aa11.96□□□□□ -0.49
VPS9D1-202ENST00000561976 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 LOC102723996A0A087X1L8 192 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1B0GU03 582 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 ST8SIA5O15466 376 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 TUSC2O75896 110 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 CTXN2P0C2S0 81 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 IAPPP10997 89 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 COX6A1P12074 109 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 F2RP25116 425 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 SSTP61278 116 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 FGF12P61328 243 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 PRDX4Q13162 271 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 SSX9Q7RTT3 188 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 IL22RA2Q969J5 263 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 ATP23Q9Y6H3 246 aa11.96□□□□□ -0.5
VPS9D1-202ENST00000561976 SMCO3A2RU48 225 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 TSTD3H0UI37 97 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 TRAPPC2LH3BP13 241 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 DNPH1O43598 174 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 TRAPPC6AO75865 159 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 UMODP07911 640 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 PSG2P11465 335 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 RAB40CQ96S21 281 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 TGOLN2O43493 480 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 METTL15P1P0C7V9 234 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 SSX3Q99909 188 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 HIPK2Q9H2X6 1198 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 WDR54Q9H977 334 aa11.95□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A0G2JMM0 328 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1W2PPB8 328 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 A0A1W2PRS3 328 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 KIR3DP1A8MWS1 328 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 CCL2P13500 99 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 RND2P52198 227 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 PKIAP61925 76 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 SRSF7Q16629 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 C9orf135Q5VTT2 229 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 OR10D3Q8NH80 312 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 DUSP23Q9BVJ7 150 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 C1QTNF5Q9BXJ0 243 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 SDF2L1Q9HCN8 221 aa11.94□□□□□ -0.5
VPS9D1-202ENST00000561976 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms