RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ACKR1Q16570 336 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 SP6Q3SY56 376 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 PRSS33Q8NF86 280 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 HDAC8Q9BY41 377 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 MRPS16Q9Y3D3 137 aaKnown RBP16.11■□□□□ 0.17
RAB40C-206ENST00000561781 CCDC163A0A0D9SF12 145 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 A0A1B0GUS0 222 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 H0Y8X5 98 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 SLC31A1O15431 190 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 HYPMO75409 117 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 COMPP49747 757 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-206ENST00000561781 BAXQ07812 192 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 LINC00346Q8IVM7 164 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 MCEMP1Q8IX19 187 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 C1orf174Q8IYL3 243 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 TMEM252Q8N6L7 170 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 OR2M7Q8NG81 312 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 C1orf147Q96MC9 270 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-206ENST00000561781 KLHDC3Q9BQ90 382 aa16.11■□□□□ 0.17
RAB40C-206ENST00000561781 EP300Q09472 2414 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-206ENST00000561781 A0A1W2PQU0 124 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 TIAF1O95411 115 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 TCF15Q12870 199 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 VAMP3Q15836 100 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 ABCA11PQ4W5N1 156 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 MYPOPQ86VE0 399 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 BCORP1Q8N888 145 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 MBD3L1Q8WWY6 194 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 DYRK2Q92630 601 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 SLAMF6Q96DU3 332 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 SF3B5Q9BWJ5 86 aaKnown RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 FBRSQ9HAH7 460 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 SLC35D1Q9NTN3 355 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 FAM166BA8MTA8 275 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 CTXN2P0C2S0 81 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 OR3A4PP47883 348 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 DYNLT3P51808 116 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 MRPL49Q13405 166 aaKnown RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 SHBQ15464 509 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 NSDHLQ15738 373 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 Q6ZVH6 145 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF440Q8IYI8 595 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 KLHDC1Q8N7A1 406 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 OR5L1Q8NGL2 311 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 RTN4IP1Q8WWV3 396 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 DAZLQ92904 295 aaKnown RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 CDC42EP3Q9UKI2 254 aa16.1■□□□□ 0.17
RAB40C-206ENST00000561781 COA3Q9Y2R0 106 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-206ENST00000561781 DUXBA0A1W2PPF3 345 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 LRRC3CA6NJW4 275 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 VSTM2BA6NLU5 285 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 SLC35E2P0CK97 266 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 CLDN18P56856 261 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 RPL27P61353 136 aaKnown RBP16.09■□□□□ 0.17
RAB40C-206ENST00000561781 TCEA2Q15560 299 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 PRR27Q6MZM9 219 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 ZNF519Q8TB69 540 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 BCL2L2Q92843 193 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-206ENST00000561781 PATZ1Q9HBE1 687 aaKnown RBP16.09■□□□□ 0.17
RAB40C-206ENST00000561781 PRKNO60260 465 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-206ENST00000561781 IGHV4-34P06331 123 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 IFI6P09912 130 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 IL3RAP26951 378 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 CLUHP3Q96NS8 147 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 TIMM29Q9BSF4 260 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 OR10A2Q9H208 303 aa16.09■□□□□ 0.17
RAB40C-206ENST00000561781 PROB1E7EW31 1015 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 TTRP02766 147 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 RTP5Q14D33 572 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 MSMO1Q15800 293 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 ACSF3Q4G176 576 aaPredicted RBP16.08■□□□□ 0.17
RAB40C-206ENST00000561781 CA13Q8N1Q1 262 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 FAM131CQ96AQ9 280 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 CENPMQ9NSP4 180 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 RYDENQ9NUL5 291 aaKnown RBP16.08■□□□□ 0.17
RAB40C-206ENST00000561781 CLN8Q9UBY8 286 aa16.08■□□□□ 0.17
RAB40C-206ENST00000561781 SERPINE3A8MV23 424 aa16.08■□□□□ 0.16
RAB40C-206ENST00000561781 AADACP22760 399 aa16.08■□□□□ 0.16
RAB40C-206ENST00000561781 CAPZBP47756 277 aa16.08■□□□□ 0.16
RAB40C-206ENST00000561781 HINT1P49773 126 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-206ENST00000561781 ATP5SQ99766 215 aa16.08■□□□□ 0.16
RAB40C-206ENST00000561781 ZNF703Q9H7S9 590 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-206ENST00000561781 FSCN3Q9NQT6 498 aa16.08■□□□□ 0.16
RAB40C-206ENST00000561781 OR5B21A6NL26 309 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 C17orf105B2RV13 164 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 NKX2-1P43699 371 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 CDC34P49427 236 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 LCN15Q6UWW0 184 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 MSI2Q96DH6 328 aaKnown RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 STARD4Q96DR4 205 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 REPIN1Q9BWE0 567 aaKnown RBP16.07■□□□□ 0.16
RAB40C-206ENST00000561781 THADAQ6YHU6 1953 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 IGKV1D-8A0A087WSZ0 117 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 IGHV1-69-2A0A0G2JMI3 117 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 A0A0U1RQK1 487 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 IGLV3-19P01714 112 aa16.07■□□□□ 0.16
RAB40C-206ENST00000561781 HLA-HP01893 362 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms