RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 A0A1W2PPH5 198 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 hADV38S2A0JD32 116 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 TMEM82A0PJX8 343 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 ODAMA1E959 279 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 LYNX1G3V0Z9 82 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 FABP7O15540 132 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 RP2O75695 350 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 DIRAS3O95661 229 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 IGHV2-70P01814 119 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 PMP2P02689 132 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 HEXAP06865 529 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR5H8P0DN80 308 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 LYNX1P0DP58 116 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 RPS2P15880 293 aaKnown RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 NDUFB7P17568 137 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 GIFP27352 417 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 SLC6A1P30531 599 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 ECI1P42126 302 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR3A1P47881 315 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 RFX2P48378 723 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 NPY4RP50391 375 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 ATP5J2P56134 94 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 P2RX3P56373 397 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 EDDM3BP56851 147 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 DSCR9P59020 149 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 SEC61A1P61619 476 aaKnown RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 HLA-DRB3P79483 266 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 MEF2CQ06413 473 aaPredicted RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 AESQ08117 197 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 EDDM3AQ14507 147 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OXA1LQ15070 435 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 RBMS2Q15434 407 aaKnown RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 C11orf91Q3C1V1 193 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 SCGB2B2Q4G0G5 96 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 VAX1Q5SQQ9 334 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 RSBN1Q5VWQ0 802 aaPredicted RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR52W1Q6IF63 320 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OVCH2Q7RTZ1 564 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 NRARPQ7Z6K4 114 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 TGIF2LYQ8IUE0 185 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 GAPTQ8N292 157 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 CENPSQ8N2Z9 138 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 DUSP18Q8NEJ0 188 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR8B3Q8NGG8 313 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR4C16Q8NGL9 310 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR4A4PQ8NGN8 299 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR10J5Q8NHC4 309 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 PLPPR1Q8TBJ4 325 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 MRPL30Q8TCC3 161 aaKnown RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 CCDC107Q8WV48 283 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 MAFIPQ8WZ33 124 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 DYRK2Q92630 601 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 SNAPC3Q92966 411 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 GALMQ96C23 342 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 NEIL1Q96FI4 390 aaPredicted RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 GAFA1Q96PS6 74 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OR8B2Q96RD0 313 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 TMEM246Q9BRR3 403 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 GINS4Q9BRT9 223 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 HDHD3Q9BSH5 251 aaPredicted RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 SHARPINQ9H0F6 387 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 MBNL3Q9NUK0 354 aaKnown RBP5.36□□□□□ -1.55
SPG11-221ENST00000560299 DCAF16Q9NXF7 216 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 SLC2A8Q9NY64 477 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 EHFQ9NZC4 300 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 OPN4Q9UHM6 478 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 KIF25Q9UIL4 384 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 MAB21L2Q9Y586 359 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 NUBP2Q9Y5Y2 271 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 DOCK11Q5JSL3 2073 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 KIAA2026Q5HYC2 2103 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 F8P00451 2351 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 M0QYG6 137 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 NDUFS8O00217 210 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 BET1O15155 118 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 HSPA12AO43301 675 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 SSX4O60224 188 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 RGS11O94810 467 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 DHFRP00374 187 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 TCRBP04435 133 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 GSTT2P0CG29 244 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 ZBTB25P24278 435 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 IL2RGP31785 369 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 GLIPR1P48060 266 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 RAG2P55895 527 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 HERV-K104P61576 105 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 RPL31P62899 125 aaKnown RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 TMEM30BQ3MIR4 351 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 CD276Q5ZPR3 534 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 HIST2H2BCQ6DN03 193 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 LPCAT3Q6P1A2 487 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 ZNF880Q6PDB4 577 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 C11orf88Q6PI97 169 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 CLEC2AQ6UVW9 174 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 DHRS11Q6UWP2 260 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 CCBE1Q6UXH8 406 aaPredicted RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 IDO2Q6ZQW0 420 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 BTN2A1Q7KYR7 527 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 RTN4RL2Q86UN3 420 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms