RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 EHFQ9NZC4 300 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 COMMD3Q9UBI1 195 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 MMP17Q9ULZ9 603 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 HIGD1AQ9Y241 93 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 POMPQ9Y244 141 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 SOX21Q9Y651 276 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 RTEL1-TNFRSF6BF6WH68 1400 aa3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 MYH9P35579 1960 aaKnown RBP3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 DICER1Q9UPY3 1922 aaKnown RBP3.76□□□□□ -1.81
HMGB3P26-201ENST00000560051 UGGT2Q9NYU1 1516 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 A0A0G2JMM0 328 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FAM240AA0A1B0GVK7 77 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 A0A1W2PPB8 328 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GAGE12HA6NDE8 117 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MYADML2A6NDP7 307 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 COLCA2A8K830 154 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 KIR3DP1A8MWS1 328 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 EEF1E1-BLOC1S5C9J1V9 151 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FOXN1O15353 648 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 EEF1E1O43324 174 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 OR2T1O43869 369 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 EFNA2O43921 213 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 RAMP1O60894 148 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NCR1O76036 304 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GPANK1O95872 356 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NCR2O95944 276 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 TBX6O95947 436 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MAS1P04201 325 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 LGALS2P05162 132 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GPX1P07203 203 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 H1F0P07305 194 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 LGALS1P09382 135 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 OR4A8P0C604 315 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GP1BBP13224 206 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PGAM2P15259 253 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 SELEP16581 610 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GM2AP17900 193 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 ELK3P41970 407 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 CXCL12P48061 93 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 THBS3P49746 956 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 TAF6P49848 677 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 POLR2HP52434 150 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NDUFA6P56556 154 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 BACE1P56817 501 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 ISL1P61371 349 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MRPS21P82921 87 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MEF2BQ02080 365 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 LTBQ06643 244 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FAM27E3Q08E93 113 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GGTLC2Q14390 218 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 RBM39Q14498 530 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 CLINT1Q14677 625 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NECTIN1Q15223 517 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 RBMS2Q15434 407 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FAM74A1Q5RGS3 127 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 KCTD18Q6PI47 426 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 STAC2Q6ZMT1 411 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 ZNF66Q6ZN08 573 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GDPGP1Q6ZNW5 385 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FAM183BPQ6ZVS7 135 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NEGR1Q7Z3B1 354 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 C1QL2Q7Z5L3 287 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GKN2Q86XP6 184 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MMGT1Q8N4V1 131 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PLPP5Q8NEB5 264 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 NUP35Q8NFH5 326 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 C8orf46Q8TAG6 207 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 ZNF519Q8TB69 540 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 FBXO25Q8TCJ0 367 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 TMEM174Q8WUU8 243 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PCNPQ8WW12 178 aaKnown RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 DYRK2Q92630 601 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PCED1BQ96HM7 432 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 TMEM101Q96IK0 257 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 SEC22AQ96IW7 307 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MS4A4EQ96PG1 132 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 LYSMD1Q96S90 227 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 ZNF670Q9BS34 389 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 APOOQ9BUR5 198 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 GATA5Q9BWX5 397 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 SRMSQ9H3Y6 488 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 POMKQ9H5K3 350 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 BET1LQ9NYM9 111 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 PCYOX1Q9UHG3 505 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 SIGLEC7Q9Y286 467 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 DISP2A7MBM2 1401 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MYH1P12882 1939 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MAPKBP1O60336 1514 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 CLASP1Q7Z460 1538 aa3.75□□□□□ -1.81
HMGB3P26-201ENST00000560051 MAGI2Q86UL8 1455 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 TRPM1Q7Z4N2 1603 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 MYH2Q9UKX2 1941 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 A0A0G2JN53 185 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 C5orf49A4QMS7 147 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 CCL24O00175 119 aa3.74□□□□□ -1.81
HMGB3P26-201ENST00000560051 SAP18O00422 153 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms