RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 STX19Q8N4C7 294 aa16.31■□□□□ 0.2
CHRNA3-207ENST00000559941 OR4F17Q8NGA8 305 aa16.31■□□□□ 0.2
CHRNA3-207ENST00000559941 OR4F4Q96R69 305 aa16.31■□□□□ 0.2
CHRNA3-207ENST00000559941 PNMA8CA0A1B0GUJ8 204 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 A0A1W2PPK0 400 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 MYL12BO14950 172 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 LPLP06858 475 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 FAM106CPP0CH98 169 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 WNT4P56705 351 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 MADCAM1Q13477 382 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 KPRPQ5T749 579 aaPredicted RBP16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 AHSA2Q719I0 299 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 CENPVQ7Z7K6 275 aaPredicted RBP16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 BPIFB6Q8NFQ5 453 aa16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 MRPS28Q9Y2Q9 187 aaKnown RBP16.3■□□□□ 0.2
CHRNA3-207ENST00000559941 A0A1W2PPI3 338 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 CELP19835 753 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 GNG10P50151 68 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 RAB7AP51149 207 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 DOC2BQ14184 412 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 DIAPH2-AS1Q14236 149 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 GLIPR1L1Q6UWM5 242 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 LYPD6Q86Y78 171 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 OR8H3Q8N146 312 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 JAGN1Q8N5M9 183 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 NANOGP1Q8N7R0 232 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 OR52M1Q8NGK5 317 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 MUL1Q969V5 352 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 MRPS24Q96EL2 167 aaKnown RBP16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 DERL3Q96Q80 235 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 FKBP14Q9NWM8 211 aa16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 RCC2Q9P258 522 aaKnown RBP16.29■□□□□ 0.2
CHRNA3-207ENST00000559941 SH2D7A6NKC9 451 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 C15orf65H3BRN8 121 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 PIN1P1O15428 100 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 MT-ND4P03905 459 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 SNRNP70P08621 437 aaKnown RBP16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 ZNF497Q6ZNH5 498 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 DRAM1Q8N682 238 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 OR56B4Q8NH76 319 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 NEK7Q8TDX7 302 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 THRSPQ92748 146 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 ARL11Q969Q4 196 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 SPACA1Q9HBV2 294 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 MOB4Q9Y3A3 225 aa16.28■□□□□ 0.2
CHRNA3-207ENST00000559941 ORC5O43913 435 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 MAS1P04201 325 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 TCTEX1D4Q5JR98 221 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 LINC00311Q8N616 119 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 OR10X1Q8NGY0 326 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 CCDC107Q8WV48 283 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 TFAP2CQ92754 450 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 ERGIC3Q9Y282 383 aa16.27■□□□□ 0.2
CHRNA3-207ENST00000559941 A0A1W2PPE3 182 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 MCRIP1C9JLW8 97 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 ZNF816Q0VGE8 651 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 C9orf152Q5JTZ5 239 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 AWAT2Q6E213 333 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 C8orf31Q8N9H6 132 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 VCXQ9H320 206 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 GFOD1Q9NXC2 390 aa16.26■□□□□ 0.19
CHRNA3-207ENST00000559941 A0A1W2PRX2 142 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 FAM90A10PA6NDY2 464 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 FAM90A7PA6NKC0 464 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 FAM90A23PA8MXZ1 464 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 ANKRD65E5RJM6 399 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 AIPO00170 330 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 SDCBPO00560 298 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 TMEM11P17152 192 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 MAPK3P27361 379 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 LOXL3P58215 753 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 HES1Q14469 280 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 RNLSQ5VYX0 342 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 NKAIN3Q8N8D7 197 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 UBALD1Q8TB05 177 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 BANF2Q9H503 90 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 DCLRE1BQ9H816 532 aa16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 TSSC4Q9Y5U2 329 aaPredicted RBP16.25■□□□□ 0.19
CHRNA3-207ENST00000559941 TCRBV4S1A1TA0A5B7 111 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 CCRL2O00421 344 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 HSD17B6O14756 317 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 FGF16O43320 207 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 GAPDHP04406 335 aaKnown RBP16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 CDK1P06493 297 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 MGMTP16455 207 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 EBI3Q14213 229 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 Q3ZCU0 254 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 OXLD1Q5BKU9 147 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 SYT6Q5T7P8 510 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 RAB12Q6IQ22 244 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 UNQ9370/PRO34162Q6UXP9 181 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 GAPTQ8N292 157 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 TMEM104Q8NE00 496 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 OR4X2Q8NGF9 303 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 MYDGFQ969H8 173 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 UQCC2Q9BRT2 126 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 SELENOIQ9C0D9 397 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 ETAA1Q9NY74 926 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 PEX16Q9Y5Y5 336 aa16.24■□□□□ 0.19
CHRNA3-207ENST00000559941 IGHV1-3A0A0C4DH29 117 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms