RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 IGHV1-8P0DP01 117 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 FPR2P25090 351 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 DLX6P56179 175 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 GNG2P59768 71 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 PLA2G7Q13093 441 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 PNLIPRP3Q17RR3 467 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 TMEM69Q5SWH9 247 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 TCF23Q7RTU1 214 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 OR13A1Q8NGR1 328 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 OR4K15Q8NH41 348 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 MRPL30Q8TCC3 161 aaKnown RBP8.27□□□□□ -1.09
USP3-216ENST00000559873 DYNC2LI1Q8TCX1 351 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 CCDC107Q8WV48 283 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 LHX4Q969G2 390 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 SLC25A38Q96DW6 304 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 MS4A7Q9GZW8 240 aaPredicted RBP8.27□□□□□ -1.09
USP3-216ENST00000559873 AK3Q9UIJ7 227 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 NUP50Q9UKX7 468 aa8.27□□□□□ -1.09
USP3-216ENST00000559873 MEX3AA1L020 520 aaKnown RBP8.26□□□□□ -1.09
USP3-216ENST00000559873 FAM25AB3EWG3 89 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 FAM25CB3EWG5 89 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 FAM25GB3EWG6 89 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 NAPSAO96009 420 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 AVPP01185 164 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 FSHBP01225 129 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 FAM157CP0CG43 387 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 GNB3P16520 340 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 EPHA1P21709 976 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 COX7A1P24310 79 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 CDK2P24941 298 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 KIR2DS4P43632 304 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 UBE2E1P51965 193 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 TMEM50BP56557 158 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 KIR2DS1Q14954 304 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 MOGAT2Q3SYC2 334 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 PLAC9Q5JTB6 97 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 HACD4Q5VWC8 232 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 ZNF782Q6ZMW2 699 aaPredicted RBP8.26□□□□□ -1.09
USP3-216ENST00000559873 IL17RELQ6ZVW7 336 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 RTN4RL2Q86UN3 420 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 Q8N7P7 452 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 SETD6Q8TBK2 473 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 C15orf40Q8WUR7 153 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 DYRK2Q92630 601 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 ARL11Q969Q4 196 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 C6orf62Q9GZU0 229 aaPredicted RBP8.26□□□□□ -1.09
USP3-216ENST00000559873 TMEM133Q9H2Q1 129 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 MBNL3Q9NUK0 354 aaKnown RBP8.26□□□□□ -1.09
USP3-216ENST00000559873 IDI2-AS1Q9NZ38 188 aa8.26□□□□□ -1.09
USP3-216ENST00000559873 TRAV18A0A075B6X5 111 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 IGHV1-69DA0A0B4J2H0 117 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 CENPVL3A0A0U1RRI6 287 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 NPIPB11E5RHQ5 1161 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 RGS5O15539 181 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 XRCC3O43542 346 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 RGS11O94810 467 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 IGHV1-69P01742 117 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 IGHV4-38-2P0DP08 117 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
USP3-216ENST00000559873 SSTR5P35346 364 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 LGALS4P56470 323 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 HLA-DRB3P79483 266 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 C17orf58Q2M2W7 97 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 Q3ZCU0 254 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 CDNFQ49AH0 187 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 PRAMEF5Q5TYX0 476 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 RBMS3Q6XE24 437 aaKnown RBP8.25□□□□□ -1.09
USP3-216ENST00000559873 PNKDQ8N490 385 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 OR52M1Q8NGK5 317 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 MCFD2Q8NI22 146 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 CREB3L1Q96BA8 519 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 GALMQ96C23 342 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 DGCR14Q96DF8 476 aaKnown RBP8.25□□□□□ -1.09
USP3-216ENST00000559873 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 CLEC7AQ9BXN2 247 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 LINC00574Q9H8X3 128 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 BATF3Q9NR55 127 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 GNG12Q9UBI6 72 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 RABL2AQ9UBK7 228 aaPredicted RBP8.25□□□□□ -1.09
USP3-216ENST00000559873 JPT1Q9UK76 154 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 RABL2BQ9UNT1 228 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
USP3-216ENST00000559873 IGHV3OR16-10A0A075B7F0 116 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 A0A087X0M5 115 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 IGHV2-26A0A0B4J1V2 119 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 A0A1B0GX30 115 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 DPPA5A6NC42 116 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 TMEM235A6NFC5 223 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 C12orf77C9JDV5 145 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 RNASEK-C17orf49H0YIS7 233 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 F2RL2O00254 374 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 SDCBPO00560 298 aaPredicted RBP8.24□□□□□ -1.09
USP3-216ENST00000559873 TOR1AO14656 332 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 NPFFO15130 113 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 HPGDSO60760 199 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 TPPPO94811 219 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 IFNA2P01563 188 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 HBZP02008 142 aa8.24□□□□□ -1.09
USP3-216ENST00000559873 EIF4EP06730 217 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms