RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 THNSL2Q86YJ6 484 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 ZNF184Q99676 751 aaPredicted RBP10.69□□□□□ -0.7
VPS18-203ENST00000558855 TMEM138Q9NPI0 162 aa10.69□□□□□ -0.7
VPS18-203ENST00000558855 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
VPS18-203ENST00000558855 TRBV5-7A0A0A0MS05 114 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 IGHV1-3A0A0C4DH29 117 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 GNAO1P09471 354 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 C21orf33P30042 268 aaPredicted RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 ADARB1P78563 741 aaKnown RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 ZNF816Q0VGE8 651 aaPredicted RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 HES1Q14469 280 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 SLC22A6Q4U2R8 563 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 CCDC144NLQ6NUI1 221 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 ZNF497Q6ZNH5 498 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 MRPL41Q8IXM3 137 aaKnown RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 ZNF565Q8N9K5 539 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 TMEM104Q8NE00 496 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 OR4X2Q8NGF9 303 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 GGHQ92820 318 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 GHSRQ92847 366 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 MUL1Q969V5 352 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 CREB3L1Q96BA8 519 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 OR14A2Q96R54 314 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 BARHL1Q9BZE3 327 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 METTL9Q9H1A3 318 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 BABAM2Q9NXR7 383 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 ZNF281Q9Y2X9 895 aa10.68□□□□□ -0.7
VPS18-203ENST00000558855 AMMECR1Q9Y4X0 333 aaPredicted RBP10.68□□□□□ -0.7
VPS18-203ENST00000558855 TMEM30CPA0ZSE6 113 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 C12orf77C9JDV5 145 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 MAGEB3O15480 346 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 IGHG2P01859 326 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 MT-ND4P03905 459 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 FAM106CPP0CH98 169 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 DCKP27707 260 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 THBS3P49746 956 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 ZNF134P52741 427 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 RPL23AP62750 156 aaKnown RBP10.67□□□□□ -0.7
VPS18-203ENST00000558855 RIPK1Q13546 671 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 EBI3Q14213 229 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 INSL4Q14641 139 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 ATAD3CQ5T2N8 411 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 SIGIRRQ6IA17 410 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 OR2W3Q7Z3T1 314 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 Q8N9W7 124 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 OR4K15Q8NH41 348 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 ARL11Q969Q4 196 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 BANF2Q9H503 90 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 PLSCR3Q9NRY6 295 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 GFOD1Q9NXC2 390 aa10.67□□□□□ -0.7
VPS18-203ENST00000558855 RCC2Q9P258 522 aaKnown RBP10.67□□□□□ -0.7
VPS18-203ENST00000558855 HUWE1Q7Z6Z7 4374 aaKnown RBP10.66□□□□□ -0.7
VPS18-203ENST00000558855 M0QZK8 103 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 SDCBPO00560 298 aaPredicted RBP10.66□□□□□ -0.7
VPS18-203ENST00000558855 GPX5O75715 221 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 CD2P06729 351 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 FSTP19883 344 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 KCNJ3P48549 501 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 RAB7AP51149 207 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 ARHGDIBP52566 201 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
VPS18-203ENST00000558855 SLC35A2P78381 396 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 EGFEM1PQ0D2K5 195 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 GNMTQ14749 295 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 MOB3BQ86TA1 216 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 IZUMO1Q8IYV9 350 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 ZNF555Q8NEP9 628 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 OR10A7Q8NGE5 316 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 OR10V1Q8NGI7 309 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 OR10X1Q8NGY0 326 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 OR1L1Q8NH94 360 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 HAVCR2Q8TDQ0 301 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
VPS18-203ENST00000558855 HSPB9Q9BQS6 159 aa10.66□□□□□ -0.7
VPS18-203ENST00000558855 EXOSC1Q9Y3B2 195 aaKnown RBP10.66□□□□□ -0.7
VPS18-203ENST00000558855 SERPINE3A8MV23 424 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 AIPO00170 330 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 CCRL2O00421 344 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 FGF16O43320 207 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 CSTBP04080 98 aaKnown RBP10.65□□□□□ -0.7
VPS18-203ENST00000558855 RCC1P18754 421 aaPredicted RBP10.65□□□□□ -0.7
VPS18-203ENST00000558855 PPP3R1P63098 170 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 MPV17LQ2QL34 196 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 DEFB136Q30KP8 78 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 Q499Y3 187 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 GLIPR1L1Q6UWM5 242 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 SLC35E3Q7Z769 313 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 STPG2Q8N412 459 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 LINC00311Q8N616 119 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms