RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PHYHO14832 338 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SIGLEC5O15389 551 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 NDUFB3O43676 98 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 NOS1APO75052 506 aaPredicted RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 NXPH2O95156 264 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 FSTL3O95633 263 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 IGHV3-7P01780 117 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 IGHV4-59P01825 116 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 RPSAP08865 295 aaKnown RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 ATP6V1B1P15313 513 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 MUC1P15941 1255 aaPredicted RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 CFL1P23528 166 aaKnown RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 MPZP25189 248 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 CHATP28329 748 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 OR3A4PP47883 348 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 GLIPR1P48060 266 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 BMXP51813 675 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 FUT6P51993 359 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 MTCP1P56278 107 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 HILS1P60008 231 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 UBA52P62987 128 aaKnown RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 RAB40BQ12829 278 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 PLA2G7Q13093 441 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 PDZK1IP1Q13113 114 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 BAMBIQ13145 260 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 CDK5R1Q15078 307 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 ZNF585BQ52M93 769 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 KLHL22Q53GT1 634 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 PAPPA-AS1Q5QFB9 102 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 TMEM244Q5VVB8 128 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 TTC23Q5W5X9 447 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 DMKNQ6E0U4 476 aaPredicted RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 OR10K2Q6IF99 312 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 AHSA2Q719I0 299 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 LHFPL4Q7Z7J7 247 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SATL1Q86VE3 508 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 BPIFB2Q8N4F0 458 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 ZNF676Q8N7Q3 588 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 TMEM185AQ8NFB2 350 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 OR13C3Q8NGS6 347 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 OR5AK2Q8NH90 309 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SPATA3Q8NHX4 192 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 UBALD1Q8TB05 177 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 PIFOQ8TCI5 191 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 RPS4Y2Q8TD47 263 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 FAM216AQ8WUB2 273 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 TMEM158Q8WZ71 300 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 GHSRQ92847 366 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 STMN2Q93045 179 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SDSLQ96GA7 329 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 TMEM80Q96HE8 168 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 MED30Q96HR3 178 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 PGLYRP3Q96LB9 341 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 RDH12Q96NR8 316 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 GFI1Q99684 422 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 CHIAQ9BZP6 476 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 CHST5Q9GZS9 411 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 KCNK15Q9H427 330 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 OPA3Q9H6K4 179 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 DCLRE1BQ9H816 532 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SCPEP1Q9HB40 452 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 NOX4Q9NPH5 578 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 OR5V1Q9UGF6 321 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 ING4Q9UNL4 249 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 GSTK1Q9Y2Q3 226 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 SIGLEC9Q9Y336 463 aa3.42□□□□□ -1.86
SPG11-211ENST00000558561 RPL36Q9Y3U8 105 aaKnown RBP3.42□□□□□ -1.86
SPG11-211ENST00000558561 TRAV24A0A0B4J272 114 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 IGHV1-69DA0A0B4J2H0 117 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TRBV5-5A0A0J9YX44 114 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TMEM89A2RUT3 159 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 OR5B21A6NL26 309 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 GABRPO00591 440 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 NDUFA2O43678 99 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 ENSAO43768 121 aaKnown RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 FADS2O95864 444 aaKnown RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 OR2H2O95918 312 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 IGHV1-69P01742 117 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 MT-ND2P03891 347 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 ISG15P05161 165 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CLEC3BP05452 202 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 MELTFP08582 738 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CGB3P0DN86 165 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CGB7P0DN87 165 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 PRKACAP17612 351 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 IGFBP3P17936 291 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 HNF1AP20823 631 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 MDKP21741 143 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 PRTN3P24158 256 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 COX7A1P24310 79 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CD24P25063 80 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 DCKP27707 260 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 TGFBR2P37173 567 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 OR3A1P47881 315 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 CAPZA1P52907 286 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 GBX2P52951 348 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 ATP1B3P54709 279 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 GABPB1Q06547 395 aaPredicted RBP3.41□□□□□ -1.86
SPG11-211ENST00000558561 AESQ08117 197 aa3.41□□□□□ -1.86
SPG11-211ENST00000558561 IL24Q13007 206 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms