RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PSPNO60542 156 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 PGA5P0DJD9 388 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 OMGP23515 440 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 POLR2GP62487 172 aaKnown RBP eCLIP8.93□□□□□ -0.98
TPM1-210ENST00000558264 IL13RA2Q14627 380 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 ZNF71Q9NQZ8 489 aaPredicted RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 DUSP13Q9UII6 198 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 PPP1R3CQ9UQK1 317 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 POLDIP2Q9Y2S7 368 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 RBM7Q9Y580 266 aaKnown RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 CEP295Q9C0D2 2601 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 TUSC2O75896 110 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 ZNF16P17020 682 aaPredicted RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 ERVK11-1P61568 191 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 DEFA5Q01523 94 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 FAM76BQ5HYJ3 339 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 CXorf66Q5JRM2 361 aaPredicted RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 BHLHA15Q7RTS1 189 aaPredicted RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 LRP11Q86VZ4 500 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
TPM1-210ENST00000558264 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 PLSCR4Q9NRQ2 329 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 NUP50Q9UKX7 468 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 KCNS2Q9ULS6 477 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 FAM215AQ9Y5M1 114 aa8.93□□□□□ -0.98
TPM1-210ENST00000558264 IGHV2OR16-5A0A0B4J2B6 119 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 AHRRA9YTQ3 701 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 MED6O75586 246 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 HAND1O96004 215 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 CGAP01215 116 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 GLAP06280 429 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 FAM157CP0CG43 387 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 MSMPQ1L6U9 139 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 ZNF324BQ6AW86 544 aaPredicted RBP8.92□□□□□ -0.98
TPM1-210ENST00000558264 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 Q6ZS49 121 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
TPM1-210ENST00000558264 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 OR8G5Q8NG78 346 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 C17orf50Q8WW18 174 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 SH3BGRL2Q9UJC5 107 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 RFNGQ9Y644 331 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 KRBOX1C9JBD0 128 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 M0R1B8 84 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 ST8SIA3O43173 380 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 SSSCA1O60232 199 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 PGLYRP1O75594 196 aaPredicted RBP8.92□□□□□ -0.98
TPM1-210ENST00000558264 OR8U9P0C7N5 309 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 LPAR6P43657 344 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 CAV2P51636 162 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 NAAAQ02083 359 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 AESQ08117 197 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 RTP5Q14D33 572 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 LINC00596Q86U02 117 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 C11orf53Q8IXP5 236 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 CCDC36Q8IYA8 594 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 DMBX1Q8NFW5 382 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 OR8U1Q8NH10 309 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
TPM1-210ENST00000558264 S100PBPQ96BU1 408 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 OR2W1Q9Y3N9 320 aa8.92□□□□□ -0.98
TPM1-210ENST00000558264 DIDO1Q9BTC0 2240 aaKnown RBP8.91□□□□□ -0.98
TPM1-210ENST00000558264 A0A0G2JRQ6 117 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 A0A1B0GW55 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 FAM24AA6NFZ4 105 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 OR5H1A6NKK0 313 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 E5RGE8 158 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 FGF16O43320 207 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 PTBP3O95758 552 aaKnown RBP8.91□□□□□ -0.98
TPM1-210ENST00000558264 HOXD4P09016 255 aaPredicted RBP8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L2P0CJ85 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L3P0CJ86 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L4P0CJ87 422 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L5P0CJ88 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L6P0CJ89 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4L7P0CJ90 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 PSG2P11465 335 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 CACNA1DQ01668 2161 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 CLINT1Q14677 625 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 ZNF474Q6S9Z5 364 aaPredicted RBP8.91□□□□□ -0.98
TPM1-210ENST00000558264 ZNF497Q6ZNH5 498 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 CMTM1Q8IZ96 169 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 H1FOOQ8IZA3 346 aaPredicted RBP8.91□□□□□ -0.98
TPM1-210ENST00000558264 OR4D5Q8NGN0 318 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 OR4A4PQ8NGN8 299 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 MARC2Q969Z3 335 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 DUX4Q9UBX2 424 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 NSG2Q9Y328 171 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 TMED3Q9Y3Q3 217 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 PRSS44E7EML9 344 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 SH2D1BO14796 132 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 TSPAN4O14817 238 aa8.91□□□□□ -0.98
TPM1-210ENST00000558264 CNOT4O95628 575 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms