RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 LPLP06858 475 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 SNRNP70P08621 437 aaKnown RBP12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 GTF2F2P13984 249 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 CELP19835 753 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 MNDAP41218 407 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 ATAD3CQ5T2N8 411 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 NANOGP1Q8N7R0 232 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 OR10A7Q8NGE5 316 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 OR56B4Q8NH76 319 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 CAPSLQ8WWF8 208 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 AKR1E2Q96JD6 320 aa12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 RCC2Q9P258 522 aaKnown RBP12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 MRPS28Q9Y2Q9 187 aaKnown RBP12.91□□□□□ -0.34
AC027088.1-201ENST00000557966 INSL4Q14641 139 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 OR5AU1Q8NGC0 362 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 CCDC107Q8WV48 283 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 R3HDM4Q96D70 268 aa12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 NKX1-2Q9UD57 310 aaPredicted RBP12.9□□□□□ -0.34
AC027088.1-201ENST00000557966 H3BUI4 141 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 CD1AP06126 327 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 CD83Q01151 205 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 KPRPQ5T749 579 aaPredicted RBP12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 SGCDQ92629 289 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 ARL11Q969Q4 196 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 MOB4Q9Y3A3 225 aa12.89□□□□□ -0.35
AC027088.1-201ENST00000557966 IGHV3-43A0A0B4J1X8 118 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 A0A1W2PRX2 142 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 AIPO00170 330 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 MT-ND4P03905 459 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 CDK1P06493 297 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 IGHV3-43DP0DP04 118 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 GPR176Q14439 515 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 BANF2Q9H503 90 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 GFOD1Q9NXC2 390 aa12.88□□□□□ -0.35
AC027088.1-201ENST00000557966 H0YHG0 523 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 SDCBPO00560 298 aaPredicted RBP12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 HSD17B6O14756 317 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 ORC5O43913 435 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 MGMTP16455 207 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 GZMHP20718 246 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 VHLP40337 213 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 REG1BP48304 166 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 RAB7AP51149 207 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 LOXL3P58215 753 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 C9orf152Q5JTZ5 239 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 RAB12Q6IQ22 244 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 CDH26Q8IXH8 852 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 OR8H3Q8N146 312 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 GAPTQ8N292 157 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 OR10X1Q8NGY0 326 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 NRG4Q8WWG1 115 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 MRPS24Q96EL2 167 aaKnown RBP12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 Q96M66 194 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 OR4F4Q96R69 305 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 ETAA1Q9NY74 926 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 ERGIC3Q9Y282 383 aa12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 LSM2Q9Y333 95 aaKnown RBP12.87□□□□□ -0.35
AC027088.1-201ENST00000557966 C12orf77C9JDV5 145 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 M0QZK8 103 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 SLC31A2O15432 143 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 IGKV1D-33P01593 117 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 IGKV1-33P01594 117 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 PRB2P02812 416 aaPredicted RBP12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 TMEM11P17152 192 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 AQP4P55087 323 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 HES1Q14469 280 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 SYT6Q5T7P8 510 aaPredicted RBP12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 RNLSQ5VYX0 342 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
AC027088.1-201ENST00000557966 NKAIN3Q8N8D7 197 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms