RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 C1orf229Q6ZS94 237 aaPredicted RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 RIMS4Q9H426 269 aaPredicted RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 BATF3Q9NR55 127 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 CALYQ9NYX4 217 aa17.45■□□□□ 0.38
CASC4-204ENST00000557945 ELF5Q9UKW6 265 aaPredicted RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 SONP18583 2426 aaKnown RBP17.45■□□□□ 0.38
CASC4-204ENST00000557945 TMEM235A6NFC5 223 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 C17orf98A8MV24 154 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 NAPSAO96009 420 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 RCC1P18754 421 aaPredicted RBP17.44■□□□□ 0.38
CASC4-204ENST00000557945 GZMHP20718 246 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 TALDO1P37837 337 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 MNDAP41218 407 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 C6orf183Q5T699 404 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 PRAMEF5Q5TYX0 476 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 ZNF782Q6ZMW2 699 aaPredicted RBP17.44■□□□□ 0.38
CASC4-204ENST00000557945 RFESDQ8TAC1 157 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 UPRTQ96BW1 309 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 TMEM160Q9NX00 188 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 KCNIP1Q9NZI2 227 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 ADAM30Q9UKF2 790 aa17.44■□□□□ 0.38
CASC4-204ENST00000557945 KBTBD11-OT1A0A1B0GTJ5 212 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 INAFM1C9JVW0 142 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 CLPXO76031 633 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 RBP4P02753 201 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 OMGP23515 440 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 PRTN3P24158 256 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 SSTR5P35346 364 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 SRP14P37108 136 aaKnown RBP17.43■□□□□ 0.38
CASC4-204ENST00000557945 GNG2P59768 71 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 MADCAM1Q13477 382 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 LTC4SQ16873 150 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 C17orf58Q2M2W7 97 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 HACD4Q5VWC8 232 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 LAX1Q8IWV1 398 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 C11orf42Q8N5U0 333 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 UBALD1Q8TB05 177 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 LHX4Q969G2 390 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 ARL11Q969Q4 196 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 MIXL1Q9H2W2 232 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.43■□□□□ 0.38
CASC4-204ENST00000557945 EXTL2Q9UBQ6 330 aa17.43■□□□□ 0.38
CASC4-204ENST00000557945 MRPS7Q9Y2R9 242 aaKnown RBP17.43■□□□□ 0.38
CASC4-204ENST00000557945 IGHV3OR16-10A0A075B7F0 116 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 CGB3P0DN86 165 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 CGB7P0DN87 165 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 IGHV1-8P0DP01 117 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 TAS2R20P59543 309 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 TRAT1Q6PIZ9 186 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 PDZD9Q8IXQ8 264 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 PRR18Q8N4B5 295 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 TEX29Q8N6K0 151 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 NANPQ8TBE9 248 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 NUDCD2Q8WVJ2 157 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 NXF2Q9GZY0 626 aaKnown RBP17.42■□□□□ 0.38
CASC4-204ENST00000557945 AUNIPQ9H7T9 357 aa17.42■□□□□ 0.38
CASC4-204ENST00000557945 MBNL3Q9NUK0 354 aaKnown RBP17.42■□□□□ 0.38
CASC4-204ENST00000557945 TRBV6-6A0A0A6YYG2 114 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 TRAV40A0A0B4J280 105 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 C12orf77C9JDV5 145 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 MMP23AO75900 390 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 KLRD1Q13241 179 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 PNLIPRP3Q17RR3 467 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 HEPN1Q6WQI6 88 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 MOB1BQ7L9L4 216 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 BEX2Q9BXY8 128 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 TAF9BQ9HBM6 251 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 IDI2-AS1Q9NZ38 188 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 SESN1Q9Y6P5 492 aa17.41■□□□□ 0.38
CASC4-204ENST00000557945 SPINT2O43291 252 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 ORC5O43913 435 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 PTHLHP12272 177 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 COX7A1P24310 79 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 NFYBP25208 207 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 PITPNAQ00169 270 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 GPR157Q5UAW9 335 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 NCR3LG1Q68D85 454 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 Q6ZPA2 131 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 SUCNR1Q9BXA5 334 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 MMP27Q9H306 513 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 HEXA-AS1Q9H8Q6 139 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 UNKLQ9H9P5 680 aaKnown RBP17.4■□□□□ 0.38
CASC4-204ENST00000557945 Q9N2K0 584 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 RAB9BQ9NP90 201 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 CDC42EP3Q9UKI2 254 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 C15orf65H3BRN8 121 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 FCGR3AP08637 254 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 IGHV4-38-2P0DP08 117 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 HOXB4P17483 251 aaPredicted RBP17.4■□□□□ 0.38
CASC4-204ENST00000557945 GDNFP39905 211 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 KLF17Q5JT82 389 aaPredicted RBP17.4■□□□□ 0.38
CASC4-204ENST00000557945 ZNF880Q6PDB4 577 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 CNIH2Q6PI25 160 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 BAIAP2L2Q6UXY1 529 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 OR1L1Q8NH94 360 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 TNFRSF14Q92956 283 aa17.4■□□□□ 0.38
CASC4-204ENST00000557945 ZNF230Q9UIE0 474 aaPredicted RBP17.4■□□□□ 0.38
CASC4-204ENST00000557945 MTORP42345 2549 aa17.39■□□□□ 0.37
CASC4-204ENST00000557945 TEP1Q99973 2627 aaKnown RBP17.39■□□□□ 0.37
CASC4-204ENST00000557945 CENPVL3A0A0U1RRI6 287 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms