RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PSG2P11465 335 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 AKR1C4P17516 323 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 CD34P28906 385 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 OR3A1P47881 315 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 UQCRFS1P47985 274 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 TAS2R31P59538 309 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 SELENOVP59797 346 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
SPG11-204ENST00000557866 IFITM2Q01629 132 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 COL10A1Q03692 680 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 SURF2Q15527 256 aaPredicted RBP6.17□□□□□ -1.42
SPG11-204ENST00000557866 MST1LQ2TV78 715 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 FAM201AQ5SY85 155 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 CLEC18BQ6UXF7 455 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 LDLRAD3Q86YD5 345 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 GCSAMQ8N6F7 178 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 CD177Q8N6Q3 437 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 UXS1Q8NBZ7 420 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 OR5T2Q8NGG2 359 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 ZFAND1Q8TCF1 268 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 MOB3AQ96BX8 217 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 SHARPINQ9H0F6 387 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 GFOD1Q9NXC2 390 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 RASL12Q9NYN1 266 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 TREM2Q9NZC2 230 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 OR14J1Q9UGF5 321 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 ERRFI1Q9UJM3 462 aaPredicted RBP6.17□□□□□ -1.42
SPG11-204ENST00000557866 WIPI2Q9Y4P8 454 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 SMG1Q96Q15 3661 aaKnown RBP6.17□□□□□ -1.42
SPG11-204ENST00000557866 ITPR1Q14643 2758 aa6.17□□□□□ -1.42
SPG11-204ENST00000557866 IGKV1D-17A0A075B6S4 117 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 FAM172BPA6NC97 362 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 DEFB108AA8MXU0 73 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 IFNL4K9M1U5 179 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 CCSO14618 274 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 ZNF737O75373 536 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 TUSC2O75896 110 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 DUS4LO95620 317 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 PPYP01298 95 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 ADH4P08319 380 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 ZNF728P0DKX0 622 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 HLA-GP17693 338 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 GNLYP22749 145 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 VAMP1P23763 118 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 ERP29P30040 261 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 PRDX2P32119 198 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 MDH2P40926 338 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 ECI1P42126 302 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 KCNJ3P48549 501 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 UCP3P55916 312 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 FXYD4P59646 89 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 RAP2BP61225 183 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 SEC61A1P61619 476 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 IL13RA1P78552 427 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 TNFAIP6P98066 277 aaPredicted RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 SORDQ00796 357 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 SRSF4Q08170 494 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 RBM39Q14498 530 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 ATXN7L3Q14CW9 347 aaPredicted RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 SLC9A3R2Q15599 337 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 SMIM21Q3B7S5 101 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 ANKRD55Q3KP44 614 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 TMEM128Q5BJH2 165 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 FIP1L1Q6UN15 594 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 ZCCHC24Q8N2G6 241 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 C9orf62Q8N4C0 152 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 BOLLQ8N9W6 283 aaKnown RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 OR5M8Q8NGP6 311 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 OR2T35Q8NGX2 323 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 LILRB1Q8NHL6 650 aaPredicted RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 GRPEL2Q8TAA5 225 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 Q8TCH9 128 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 CASTOR1Q8WTX7 329 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 FAM222BQ8WU58 562 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 TOMM40LQ969M1 308 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 COQ2Q96H96 371 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 SCGB3A2Q96PL1 93 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 DHRS9Q9BPW9 319 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 CABLES2Q9BTV7 478 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 SEBOXQ9HB31 216 aaPredicted RBP6.16□□□□□ -1.42
SPG11-204ENST00000557866 NGBQ9NPG2 151 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 DCAF16Q9NXF7 216 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 COQ3Q9NZJ6 369 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 OPN4Q9UHM6 478 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 PKD1L2Q7Z442 2459 aa6.16□□□□□ -1.42
SPG11-204ENST00000557866 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 PCNX1Q96RV3 2341 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 TRAV14DV4A0A0A6YYC5 116 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 A0A0B4J2A0 478 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 IGKV1D-13A0A0B4J2D9 117 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 KIR2DS1A0A191URI9 304 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 TMEM30CPA0ZSE6 113 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 CRYM-AS1A6NIL9 109 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 C17orf100A8MU93 164 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 BET1O15155 118 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 SLC22A5O76082 557 aa6.15□□□□□ -1.42
SPG11-204ENST00000557866 CYB5R3P00387 301 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms