RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 MYF6P23409 242 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 GP2P55259 537 aaKnown RBP13.36□□□□□ -0.27
NEDD4-212ENST00000557845 SLC35A2P78381 396 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 DEFA6Q01524 100 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 GPR50Q13585 617 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 IRF3Q14653 427 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 MED22Q15528 200 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 ARSJQ5FYB0 599 aaPredicted RBP13.36□□□□□ -0.27
NEDD4-212ENST00000557845 ZNF497Q6ZNH5 498 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 TMEM104Q8NE00 496 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 WIPF2Q8TF74 440 aaPredicted RBP13.36□□□□□ -0.27
NEDD4-212ENST00000557845 ARL11Q969Q4 196 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 RPEQ96AT9 228 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 RBM14Q96PK6 669 aaKnown RBP13.36□□□□□ -0.27
NEDD4-212ENST00000557845 OCSTAMPQ9BR26 566 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 UQCC2Q9BRT2 126 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 SLC25A33Q9BSK2 321 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 TMED9Q9BVK6 235 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 SELENOIQ9C0D9 397 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 RCC2Q9P258 522 aaKnown RBP13.36□□□□□ -0.27
NEDD4-212ENST00000557845 TPRKBQ9Y3C4 175 aa13.36□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A18PA6NE21 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A16PA6NEW6 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A20PA6NIJ5 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A12PA8MX19 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A5PA8MXJ8 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 ORC5O43913 435 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 OR2F2O95006 317 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A15PP0C7V4 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A13PP0C7W8 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A14PP0C7W9 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A24PP0C7X0 464 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 CD28P10747 220 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 MGMTP16455 207 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 GNG10P50151 68 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FBLN7Q53RD9 439 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 FAM27D1Q5T7N8 215 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 RAB12Q6IQ22 244 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 THNSL2Q86YJ6 484 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 CAPSLQ8WWF8 208 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 TOMM40LQ969M1 308 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 DUSP21Q9H596 190 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 GHRLQ9UBU3 117 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 PEX16Q9Y5Y5 336 aa13.35□□□□□ -0.27
NEDD4-212ENST00000557845 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A10PA6NDY2 464 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A7PA6NKC0 464 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 FAM90A23PA8MXZ1 464 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 AIPO00170 330 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 FBXO24O75426 580 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 CRTAPO75718 401 aaPredicted RBP13.34□□□□□ -0.27
NEDD4-212ENST00000557845 SC5DO75845 299 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 FAM106CPP0CH98 169 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 VHLP40337 213 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 VDAC2P45880 294 aaPredicted RBP13.34□□□□□ -0.27
NEDD4-212ENST00000557845 MADCAM1Q13477 382 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 SYT6Q5T7P8 510 aaPredicted RBP13.34□□□□□ -0.27
NEDD4-212ENST00000557845 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 LRRTM1Q86UE6 522 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 OR52M1Q8NGK5 317 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 ETAA1Q9NY74 926 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 TRAPPC2LQ9UL33 140 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 WNK1Q9H4A3 2382 aa13.34□□□□□ -0.27
NEDD4-212ENST00000557845 VWFP04275 2813 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 SDCBPO00560 298 aaPredicted RBP13.33□□□□□ -0.28
NEDD4-212ENST00000557845 AMY1AP04745 511 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 AMY2AP04746 511 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 GLAP06280 429 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 SRMP19623 302 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 FUT3P21217 361 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 RAB7AP51149 207 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 LOXL3P58215 753 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM95Q3KNT9 176 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 ABCA11PQ4W5N1 156 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 GLT8D1Q68CQ7 371 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 SIGIRRQ6IA17 410 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 LYG1Q8N1E2 194 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 GAPTQ8N292 157 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 OR4K15Q8NH41 348 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 UBALD1Q8TB05 177 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 Q96M66 194 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 VCX3BQ9H321 246 aa13.33□□□□□ -0.28
NEDD4-212ENST00000557845 A0A1W2PPI3 338 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 M0QZK8 103 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 RGS10O43665 173 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 LPLP06858 475 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 SNRNP70P08621 437 aaKnown RBP13.32□□□□□ -0.28
NEDD4-212ENST00000557845 EMX1Q04741 257 aaPredicted RBP13.32□□□□□ -0.28
NEDD4-212ENST00000557845 RBM48Q5RL73 367 aaKnown RBP13.32□□□□□ -0.28
NEDD4-212ENST00000557845 C1orf100Q5SVJ3 147 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 FAM53AQ6NSI3 398 aaPredicted RBP13.32□□□□□ -0.28
NEDD4-212ENST00000557845 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 DRAM1Q8N682 238 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms