RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PANO1I0J062 215 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 M0R1X1 148 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 TAAR5O14804 337 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 MYL12BO14950 172 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 PLIN3O60664 434 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 REM1O75628 298 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 IGKV1D-16P01601 117 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 PPBPP02775 128 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 MRPL3P09001 348 aaKnown RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 MMP7P09237 267 aaPredicted RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 IGHV1-8P0DP01 117 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 PSMB9P28065 219 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 RPL12P30050 165 aaKnown RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ADORA1P30542 326 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 APLNRP35414 380 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 RPL5P46777 297 aaKnown RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 RPS9P46781 194 aaKnown RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 SRP9P49458 86 aaKnown RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 CRYBA4P53673 196 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 WNT4P56705 351 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 SKP2Q13309 424 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 FAM53BQ14153 422 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 SHHQ15465 462 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 CEACAM21Q3KPI0 293 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ARHGAP11BQ3KRB8 267 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 PYCR3Q53H96 274 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM97Q5BJF2 176 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 HIST2H3PS2Q5TEC6 136 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 FAM71E1Q6IPT2 247 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 TNFAIP8L2Q6P589 184 aaPredicted RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OPN5Q6U736 354 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OLIG3Q7RTU3 272 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 GAPTQ8N292 157 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 LRRC25Q8N386 305 aaPredicted RBP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF645Q8N7E2 425 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ARIH2OSQ8N7S6 290 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 Q8N976 141 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 GPR32P1Q8NGA4 272 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OR1J4Q8NGS1 313 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OR13G1Q8NGZ3 307 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OR10A6Q8NH74 314 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OR1S1Q8NH92 325 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 C15orf40Q8WUR7 153 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 FAM104AQ969W3 186 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 DDIT4LQ96D03 193 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 SMIM12Q96EX1 92 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 QKIQ96PU8 341 aaKnown RBP eCLIP2.11□□□□□ -2.07
TRAV28-201ENST00000557548 EMC6Q9BV81 110 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 TMED9Q9BVK6 235 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 BIN3Q9NQY0 253 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 OR12D3Q9UGF7 316 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ANXA10Q9UJ72 324 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 RAB22AQ9UL26 194 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 BRWD3Q6RI45 1802 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 NEO1Q92859 1461 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 ARHGAP35Q9NRY4 1499 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 IQGAP1P46940 1657 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 GCC2Q8IWJ2 1684 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 EFCAB5A4FU69 1503 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 LTBP1Q14766 1721 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 NALCNQ8IZF0 1738 aa2.11□□□□□ -2.07
TRAV28-201ENST00000557548 NID2Q14112 1375 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CARMIL3Q8ND23 1372 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TIAM1Q13009 1591 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 VIRMAQ69YN4 1812 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 BRCA1P38398 1863 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 FANCAO15360 1455 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 IGLV1-50A0A075B6I6 118 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CEACAM18A8MTB9 384 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 MIF4GDA9UHW6 222 aaKnown RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 OR11H12B2RN74 326 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TRIM49D1C9J1S8 452 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 MANBAO00462 879 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 PSPHP1O15172 72 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ANGPTL7O43827 346 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 NDUFS5O43920 106 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 MED6O75586 246 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 GCM2O75603 506 aaPredicted RBP2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CNMDO75829 334 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 HAND1O96004 215 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CRHP06850 196 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 IFI30P13284 250 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 ADRB3P13945 408 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CD99P14209 185 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 AKR1C4P17516 323 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CCR7P32248 378 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 DRD3P35462 400 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 GCLMP48507 274 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TCTAP57738 103 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TAS2R41P59536 307 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 LAMTOR4Q0VGL1 99 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 PNOCQ13519 176 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 PPP1R1AQ13522 171 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 MPV17L2Q567V2 206 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 TTC32Q5I0X7 151 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 FAM78AQ5JUQ0 283 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CYB5R2Q6BCY4 276 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 CYHR1Q6ZMK1 362 aa2.1□□□□□ -2.07
TRAV28-201ENST00000557548 RASSF6Q6ZTQ3 369 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms