RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 DYNC1I2Q13409 638 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 KRR1Q13601 381 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 TRAM1Q15629 374 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TOMM34Q15785 309 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 HIST3H3Q16695 136 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 NDUFAF6Q330K2 333 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CCDC58Q4VC31 144 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TEX30Q5JUR7 227 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 RIPPLY2Q5TAB7 128 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 LINC01590Q5TEZ4 76 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TMEM236Q5W0B7 351 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 DNM1P34Q6PK57 102 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 DEGS2Q6QHC5 323 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 Q6ZPB1 254 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 TMPPEQ6ZT21 453 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 LHFPL4Q7Z7J7 247 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 HMGN2P46Q86SG4 172 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 MTURNQ8N3F0 131 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 STX19Q8N4C7 294 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ACBD7Q8N6N7 88 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 GATSQ8NAP1 163 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR4K17Q8NGC6 315 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR52I1Q8NGK6 324 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR1J4Q8NGS1 313 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR2T4Q8NH00 348 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR2T27Q8NH04 317 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 OR6X1Q8NH79 312 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 THRSPQ92748 146 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ISOC1Q96CN7 298 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 HAVCR1Q96D42 359 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 SH3YL1Q96HL8 342 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 OXGR1Q96P68 337 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ERMAPQ96PL5 475 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 CNN2Q99439 309 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 TEAD3Q99594 435 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 UTP23Q9BRU9 249 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 MED18Q9BUE0 208 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 MRPL13Q9BYD1 178 aaKnown RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 YIPF3Q9GZM5 350 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 PPDPFQ9H3Y8 114 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ZDHHC11Q9H8X9 412 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 WDR76Q9H967 626 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 CTPS2Q9NRF8 586 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 INIPQ9NRY2 104 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 NECAP2Q9NVZ3 263 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TAS2R3Q9NYW6 316 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 TVP23BQ9NYZ1 205 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ENPP5Q9UJA9 477 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 RASD1Q9Y272 281 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 KLF13Q9Y2Y9 288 aaPredicted RBP2.29□□□□□ -2.04
VRK1-207ENST00000557352 TMEM14AQ9Y6G1 99 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 USF3Q68DE3 2245 aa2.29□□□□□ -2.04
VRK1-207ENST00000557352 ROS1P08922 2347 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 TRAV17A0A0B4J275 112 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 TRDV1A0A1B0GX56 115 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 H3BMQ9 156 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 RPL36A-HNRNPH2H7BZ11 118 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 SULT2B1O00204 365 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 KPNA4O00629 521 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 XKRYO14609 159 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 GPR171O14626 319 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 TRAF3IP2O43734 574 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 EFNA2O43921 213 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 AQP8O94778 261 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 PTHP01270 115 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 PGA4P0DJD7 388 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 PGA3P0DJD8 388 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ZNF708P17019 499 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 SPI1P17947 270 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ALOX5APP20292 161 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 VDAC1P21796 283 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 CFL1P23528 166 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 CD1BP29016 333 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 GTF2E2P29084 291 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 GRPRP30550 384 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 AQP2P41181 271 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ETV6P41212 452 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 MAGEA5P43359 124 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 RPS5P46782 204 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 RGS6P49758 472 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 LHX2P50458 406 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 LSM6P62312 80 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 HTD2P86397 168 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 GLO1Q04760 184 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ATXN7L3Q14CW9 347 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 PON3Q15166 354 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 NEDD8Q15843 81 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 MESTQ5EB52 335 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 KIAA2026Q5HYC2 2103 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 CLEC12AQ5QGZ9 265 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 THEM4Q5T1C6 240 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 C10orf128Q5T292 105 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ZNF684Q5T5D7 378 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 GPR107Q5VW38 600 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 SLC25A25Q6KCM7 469 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ZNF322Q6U7Q0 402 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 TMPRSS11AQ6ZMR5 421 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms