RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 CD1BP29016 333 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 P2RX3P56373 397 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCFD1-223ENST00000557076 KLF5Q13887 457 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-223ENST00000557076 ZNF146Q15072 292 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 ZNF684Q5T5D7 378 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 TMEM42Q69YG0 159 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 VTCN1Q7Z7D3 282 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 TRAPPC6BQ86SZ2 158 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 ENTHD1Q8IYW4 607 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 RNF148Q8N7C7 305 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 ZNF565Q8N9K5 539 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 OR51L1Q8NGJ5 315 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 FAM81AQ8TBF8 368 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 PHLDA1Q8WV24 401 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-223ENST00000557076 PAIP2Q9BPZ3 127 aaKnown RBP3.53□□□□□ -1.84
SCFD1-223ENST00000557076 HSPB9Q9BQS6 159 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 CCDC28BQ9BUN5 200 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 PARD6BQ9BYG5 372 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 NMNAT2Q9BZQ4 307 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 PKIBQ9C010 78 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-223ENST00000557076 OR52D1Q9H346 318 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 FN3KQ9H479 309 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 KRT84Q9NSB2 600 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 MTCH1Q9NZJ7 389 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 DNAJC27Q9NZQ0 273 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 COPS3Q9UNS2 423 aa3.53□□□□□ -1.84
SCFD1-223ENST00000557076 DSCAML1Q8TD84 2053 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV4OR15-8A0A075B7B6 117 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 A0A087WW49 117 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 IGHV1-3A0A0C4DH29 117 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 KBTBD11-OT1A0A1B0GTJ5 212 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 FAM172BPA6NC97 362 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF729A6NN14 1252 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 F8VVB4 439 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 F8VWA3 439 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ANGPT2O15123 496 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 SPRY2O43597 315 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 TPPPO94811 219 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 HAND1O96004 215 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 H1F0P07305 194 aaKnown RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 LGALS1P09382 135 aaKnown RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 H2BFMP0C1H6 154 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM225BP0DP42 221 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 H2AFXP16104 143 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 GABRR1P24046 479 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 OR3A1P47881 315 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 NPBWR2P48146 333 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 F2RL1P55085 397 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 FAM3BP58499 235 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 EWSR1Q01844 656 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ZNF816Q0VGE8 651 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 DIAPH2-AS1Q14236 149 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 CLVS2Q5SYC1 327 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 UTF1Q5T230 341 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 PLCXD3Q63HM9 321 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 LCN12Q6JVE5 192 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 SHFQ7M4L6 423 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 TRPM8Q7Z2W7 1104 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 MOB3BQ86TA1 216 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 HAPLN4Q86UW8 402 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 CYP4Z1Q86W10 505 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ANGPTL5Q86XS5 388 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 LAX1Q8IWV1 398 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 Q8IYB0 196 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 Q8N402 240 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ZBTB8BQ8NAP8 495 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 TMEM104Q8NE00 496 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 OR8J3Q8NGG0 315 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 OR8B12Q8NGG6 310 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 OR2K2Q8NGT1 345 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 FANK1Q8TC84 345 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 EMG1Q92979 244 aaKnown RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 CEP19Q96LK0 163 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 FUZQ9BT04 418 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 CHST6Q9GZX3 395 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 NCOR1P1Q9H4R4 102 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 OR6C3Q9NZP0 311 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 STEAP1Q9UHE8 339 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 PSG11Q9UQ72 335 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ERGIC3Q9Y282 383 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 PIGLQ9Y2B2 252 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 FAM32AQ9Y421 112 aaKnown RBP3.52□□□□□ -1.85
SCFD1-223ENST00000557076 ENPP4Q9Y6X5 453 aa3.52□□□□□ -1.85
SCFD1-223ENST00000557076 PKD1P98161 4303 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 TRAV41A0A0B4J266 112 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 ODAMA1E959 279 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 OR11H12B2RN74 326 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 CXCR6O00574 342 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 SH2D1BO14796 132 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 RGS16O15492 202 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-223ENST00000557076 E2F6O75461 281 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 IGLV3-1P01715 115 aa3.51□□□□□ -1.85
SCFD1-223ENST00000557076 CSN3P07498 182 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms