RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 HIST3H2BBQ8N257 126 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 RBMXL1Q96E39 390 aaKnown RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 ZNF845Q96IR2 970 aaPredicted RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 ZNF488Q96MN9 340 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 SSX3Q99909 188 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 PRDM13Q9H4Q3 707 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 GPR35Q9HC97 309 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
SRP54-213ENST00000556994 DIDO1Q9BTC0 2240 aaKnown RBP9.75□□□□□ -0.85
SRP54-213ENST00000556994 LOC102723996A0A087X1L8 192 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 CXorf65A6NEN9 183 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 HS3ST1O14792 307 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 KLF7O75840 302 aaPredicted RBP9.74□□□□□ -0.85
SRP54-213ENST00000556994 NAPSAO96009 420 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 IAPPP10997 89 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 DEFA6Q01524 100 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 BAXQ07812 192 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 FAM90A2PQ658T7 463 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 SLC35E3Q7Z769 313 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
SRP54-213ENST00000556994 OR10D3Q8NH80 312 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 GPR146Q96CH1 333 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 FAM210BQ96KR6 192 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 MTCH1Q9NZJ7 389 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 ARHGAP21Q5T5U3 1957 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 CLEC18AA5D8T8 446 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 GJE1A6NN92 205 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 SEC14L6B5MCN3 397 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 PSG2P11465 335 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 CCL4P13236 92 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 CEACAM1P13688 526 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 EPHA8P29322 1005 aaPredicted RBP9.74□□□□□ -0.85
SRP54-213ENST00000556994 CLDN15P56746 228 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 IL24Q13007 206 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 PRDX4Q13162 271 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 GAMTQ14353 236 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 IGFBP7Q16270 282 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 TRIM61Q5EBN2 209 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 ZNF880Q6PDB4 577 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 Q6ZRM9 215 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 CLEC18CQ8NCF0 446 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 PRO1933Q9H354 126 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 SH2D2AQ9NP31 389 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
SRP54-213ENST00000556994 TRAV39A0A0B4J263 110 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 SYNGR1O43759 233 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 TUSC2O75896 110 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 IFNA5P01569 189 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 HBE1P02100 147 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 MMP7P09237 267 aaPredicted RBP9.73□□□□□ -0.85
SRP54-213ENST00000556994 METTL15P1P0C7V9 234 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 PGA5P0DJD9 388 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 ARL16Q0P5N6 197 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 ZNF726P1Q15940 193 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 STX12Q86Y82 276 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
SRP54-213ENST00000556994 RDH5Q92781 318 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 DOCK7Q96N67 2140 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 YKT6O15498 198 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 MMP9P14780 707 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 F2RP25116 425 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 MLF1P58340 268 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 FGF12P61328 243 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 PCBD1P61457 104 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 FOXO1Q12778 655 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 AGBL5Q8NDL9 886 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 OR5D13Q8NGL4 314 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 UBALD1Q8TB05 177 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 IL1F10Q8WWZ1 152 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 PHF7Q9BWX1 381 aaPredicted RBP9.73□□□□□ -0.85
SRP54-213ENST00000556994 C1QTNF5Q9BXJ0 243 aa9.73□□□□□ -0.85
SRP54-213ENST00000556994 ERRFI1Q9UJM3 462 aaPredicted RBP9.73□□□□□ -0.85
SRP54-213ENST00000556994 C5orf49A4QMS7 147 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 OR5H1A6NKK0 313 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 H0Y980 276 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 FOXG1P55316 489 aaPredicted RBP9.72□□□□□ -0.85
SRP54-213ENST00000556994 PCSK4Q6UW60 755 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 PRR18Q8N4B5 295 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 C14orf144Q96I85 54 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 ABHD14BQ96IU4 210 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SNX22Q96L94 193 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 DUSP23Q9BVJ7 150 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 OPA3Q9H6K4 179 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 WDR54Q9H977 334 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 GFOD1Q9NXC2 390 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 LRFN1Q9P244 771 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 ATP23Q9Y6H3 246 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 ARGFXA6NJG6 315 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
SRP54-213ENST00000556994 TRAPPC2LH3BP13 241 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 P04436 131 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SERPINE2P07093 398 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 CD55P08174 381 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 BCL2P10415 239 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 HIST1H1BP16401 226 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms