RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 TMEM241Q24JQ0 296 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 MPV17LQ2QL34 196 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PRTGQ2VWP7 1150 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 MS4A18Q3C1V0 323 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 FAM78AQ5JUQ0 283 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 C1orf194Q5T5A4 169 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 OTPQ5XKR4 325 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ABLIM2Q6H8Q1 611 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SLC25A24Q6NUK1 477 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 KCNIP4Q6PIL6 250 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 CBLN3Q6UW01 205 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 LANCL3Q6ZV70 420 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 LYZL2Q7Z4W2 148 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 WDR5BQ86VZ2 330 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ZNF573Q86YE8 665 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 LINC00346Q8IVM7 164 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ZNF695Q8IW36 515 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ZNF100Q8IYN0 542 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 FBXL14Q8N1E6 418 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 TMEM252Q8N6L7 170 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SLC35G3Q8N808 338 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 CYB561D1Q8N8Q1 229 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 MRPL43Q8N983 215 aaKnown RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 NAXEQ8NCW5 288 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 OR4D5Q8NGN0 318 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PPP1R35Q8TAP8 253 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 GPR119Q8TDV5 335 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 TMEM171Q8WVE6 324 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 TMEM170AQ8WVE7 144 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 RTN4IP1Q8WWV3 396 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 MBD3L1Q8WWY6 194 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 OR1E3Q8WZA6 343 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 DAZLQ92904 295 aaKnown RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 DDIT4LQ96D03 193 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 MSI2Q96DH6 328 aaKnown RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PGAM5Q96HS1 289 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 RITA1Q96K30 269 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 FAM71F1Q96KD3 344 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 C1orf147Q96MC9 270 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 LRRC3BQ96PB8 259 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 HIST1H2AAQ96QV6 131 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PRR25Q96S07 402 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ATP5SQ99766 215 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PYGO2Q9BRQ0 406 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 AGMATQ9BSE5 352 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SH3BGRL3Q9H299 93 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ELL3Q9HB65 397 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ZNF286AQ9HBT8 521 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SDF2L1Q9HCN8 221 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 FGF22Q9HCT0 170 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 Q9N2K0 584 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 CHST11Q9NPF2 352 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PNO1Q9NRX1 252 aaKnown RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SERINC1Q9NRX5 453 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 STARD5Q9NSY2 213 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ZNF701Q9NV72 531 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 P4HTMQ9NXG6 502 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 RNF186Q9NXI6 227 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 OBP2AQ9NY56 170 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ELOVL5Q9NYP7 299 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 GNG13Q9P2W3 67 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 NAT8Q9UHE5 227 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 ANXA10Q9UJ72 324 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 HSF4Q9ULV5 492 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 SLC7A11Q9UPY5 501 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 VDAC3Q9Y277 283 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 POLR1DQ9Y2S0 133 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 UBE2J1Q9Y385 318 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-208ENST00000556956 LIPGQ9Y5X9 500 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PIAS3Q9Y6X2 628 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PLXNA2O75051 1894 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 OBSL1O75147 1896 aa2.47□□□□□ -2.01
SLIRP-208ENST00000556956 PTPRSQ13332 1948 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 A0A0U1RQV5 110 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 C3orf85A0A1B0GTC6 90 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 A0A1W2PNV4 684 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IGSF23A1L1A6 192 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 CLEC18AA5D8T8 446 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 MAP1LC3B2A6NCE7 125 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 A6NCN8 305 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 NKX2-6A6NCS4 301 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ANKUB1A6NFN9 424 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM210A6NLX4 147 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 DHRS7CA6NNS2 312 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF705FA8MVS1 300 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 STMND1H3BQB6 276 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 H7BYZ3 331 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 TP53I11O14683 189 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SLC31A1O15431 190 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 XRCC2O43543 280 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PIAS2O75928 621 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 EML2O95834 649 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 DDAH2O95865 285 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SCGB1D1O95968 90 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 IGHG1P01857 330 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 PFN1P07737 140 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF705DP0CH99 300 aaPredicted RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF705BP0CI00 300 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms