RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZNF788Q6ZQV5 615 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 GVQW1Q8N7I0 195 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ASCC1Q8N9N2 400 aaKnown RBP4.39□□□□□ -1.71
ATXN3-244ENST00000556898 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 OR52I2Q8NH67 350 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 SETD6Q8TBK2 473 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CCDC107Q8WV48 283 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 RAB40AQ8WXH6 277 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ST8SIA4Q92187 359 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ERGIC1Q969X5 290 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 COQ2Q96H96 371 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-244ENST00000556898 REG4Q9BYZ8 158 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 SHARPINQ9H0F6 387 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CXorf56Q9H5V9 222 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 DIABLOQ9NR28 239 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 ABCB10Q9NRK6 738 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 PLEKHJ1Q9NW61 149 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 RASL12Q9NYN1 266 aa4.39□□□□□ -1.71
ATXN3-244ENST00000556898 RCC2Q9P258 522 aaKnown RBP4.39□□□□□ -1.71
ATXN3-244ENST00000556898 CHD3Q12873 2000 aaKnown RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 CEACAM18A8MTB9 384 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 A8MV72 311 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 SH2D1BO14796 132 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM127O75204 238 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 FUT3P21217 361 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 LMO1P25800 156 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 IL2RGP31785 369 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 TALDO1P37837 337 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MNDAP41218 407 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 GPR6P46095 362 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 GLIPR1P48060 266 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 PDLIM4P50479 330 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 GNG2P59768 71 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 PRB3Q04118 309 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 GRK1Q15835 563 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MPV17LQ2QL34 196 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 SMIM21Q3B7S5 101 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 SPIN3Q5JUX0 258 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 SPANXN2Q5MJ10 180 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 UTF1Q5T230 341 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 RSBN1Q5VWQ0 802 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 OR52W1Q6IF63 320 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 PYHIN1Q6K0P9 492 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 FAAP20Q6NZ36 180 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF841Q6ZN19 808 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 TRAPPC6BQ86SZ2 158 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 Q8IYB0 196 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 OR8H2Q8N162 312 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM185AQ8NFB2 350 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 OR4K15Q8NH41 348 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MRPL30Q8TCC3 161 aaKnown RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 NEK7Q8TDX7 302 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 GPX8Q8TED1 209 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 PHF21AQ96BD5 680 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MRPS24Q96EL2 167 aaKnown RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 SDSLQ96GA7 329 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 NEDD4LQ96PU5 975 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 CMSS1Q9BQ75 279 aaKnown RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 THAP7Q9BT49 309 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 BPESC1Q9GZL8 116 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MEGF9Q9H1U4 602 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF665Q9H7R5 613 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 MYOZ1Q9NP98 299 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 PCDHB16Q9NRJ7 776 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 ETAA1Q9NY74 926 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 CDC42EP3Q9UKI2 254 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 HSF4Q9ULV5 492 aa4.38□□□□□ -1.71
ATXN3-244ENST00000556898 HRNRQ86YZ3 2850 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-244ENST00000556898 DYSFO75923 2080 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ARFGEF3Q5TH69 2177 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 TANC2Q9HCD6 1990 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 TRAV38-1A0A0B4J264 116 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV4-61A0A0C4DH41 118 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 A0A1W2PQ09 198 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A10PA6NDY2 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A20PA6NIJ5 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 NKX6-3A6NJ46 265 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A8PA6NJQ4 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A7PA6NKC0 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A22PA8MWA6 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A12PA8MX19 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 FAM90A23PA8MXZ1 464 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 MCRIP1C9JLW8 97 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 K7N7A8 449 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 DVL1O14640 695 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
ATXN3-244ENST00000556898 ORC5O43913 435 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms