RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LRRC10Q5BKY1 277 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 FAM201AQ5SY85 155 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 AGBL2Q5U5Z8 902 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 NCR3LG1Q68D85 454 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 DPY19L2P2Q6ZN68 376 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 VMO1Q7Z5L0 202 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ARPINQ7Z6K5 226 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PDZD9Q8IXQ8 264 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OFCC1Q8IZS5 231 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 FTMTQ8N4E7 242 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 GVQW1Q8N7I0 195 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF491Q8N8L2 437 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 C19orf18Q8NEA5 215 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OR4C13Q8NGP0 309 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 OR4A16Q8NH70 328 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 SLCO4A1Q96BD0 722 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 Q96M85 177 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ADAT1Q9BUB4 502 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PPA2Q9H2U2 334 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ANKRD19PQ9H560 264 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 DCLRE1BQ9H816 532 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 WDR76Q9H967 626 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 TMBIM4Q9HC24 238 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 C1orf123Q9NWV4 160 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF581Q9P0T4 197 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 RPUSD1Q9UJJ7 312 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 FOXA2Q9Y261 457 aaPredicted RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 IER3IP1Q9Y5U9 82 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 YLPM1P49750 1951 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 PLCE1Q9P212 2302 aa3.79□□□□□ -1.8
HIF1A-209ENST00000556827 HEATR1Q9H583 2144 aaKnown RBP3.79□□□□□ -1.8
HIF1A-209ENST00000556827 TENM1Q9UKZ4 2725 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 A0A087WUU8 490 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 CD300LBA8K4G0 201 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 FAM220BPB1ANY3 271 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 BHLHE40O14503 412 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 NDUFAB1O14561 156 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 NPFFO15130 113 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 OR10H3O60404 316 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF253O75346 499 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 GYPAP02724 150 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 CFL1P23528 166 aaKnown RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 RBMXP38159 391 aaKnown RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 IFNGR2P38484 337 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 DDOSTP39656 456 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 GZMMP51124 257 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 MAB21L1Q13394 359 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 MPPED2Q15777 294 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 CCDC92Q53HC0 331 aaPredicted RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 MESTQ5EB52 335 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 COQ5Q5HYK3 327 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 PRAMEF6Q5VXH4 476 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 TBPL2Q6SJ96 375 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 SMARCD3Q6STE5 483 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 TSEN54Q7Z6J9 526 aaKnown RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 CALHM3Q86XJ0 350 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 LRRC75AQ8NAA5 344 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 OR51G2Q8NGK0 314 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 RHOXF1Q8NHV9 184 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 H1FXQ92522 213 aaKnown RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 TLCD1Q96CP7 247 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 C5orf30Q96GV9 206 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 ERMAPQ96PL5 475 aaPredicted RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 TBX15Q96SF7 602 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 COPS4Q9BT78 406 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 FUNDC2Q9BWH2 189 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 SIRPDQ9H106 197 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 METTL8Q9H825 291 aaKnown RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 KAAG1Q9UBP8 84 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF107Q9UII5 783 aaPredicted RBP3.78□□□□□ -1.8
HIF1A-209ENST00000556827 N6AMT1Q9Y5N5 214 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 SNX5Q9Y5X3 404 aa3.78□□□□□ -1.8
HIF1A-209ENST00000556827 MGAM2Q2M2H8 2515 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 LOC100653049A0A140TA62 436 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 A0A1B0GWJ7 208 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 A0A1W2PRD5 423 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 FOXI3A8MTJ6 420 aaPredicted RBP3.77□□□□□ -1.81
HIF1A-209ENST00000556827 G3V4G9 280 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 M0R135 149 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 CXCR6O00574 342 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 CDC42EP2O14613 210 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 IMPA2O14732 288 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 XRCC2O43543 280 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 KRT34O76011 436 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 APOC1P02654 83 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 ACSM4P0C7M7 580 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 UBE2E1P51965 193 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 HIST1H3AP68431 136 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 IL5RAQ01344 420 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 DGCR6Q14129 220 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 SLC22A6Q4U2R8 563 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 CLEC12AQ5QGZ9 265 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 HIST2H3PS2Q5TEC6 136 aa3.77□□□□□ -1.81
HIF1A-209ENST00000556827 OTPQ5XKR4 325 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms