RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 DPPA2Q7Z7J5 298 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 LRRTM1Q86UE6 522 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 NR2C2APQ86WQ0 139 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 C20orf196Q8IYI0 205 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 RDH10Q8IZV5 341 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 TOMM5Q8N4H5 51 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ZNF283Q8N7M2 679 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 RBMXL3Q8N7X1 1067 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 CLEC18CQ8NCF0 446 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 DEFB124Q8NES8 71 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR5T1Q8NG75 326 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR4M1Q8NGD0 313 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR5D14Q8NGL3 314 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR4A4PQ8NGN8 299 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR5M1Q8NGP8 315 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 LGALS14Q8TCE9 139 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SMIM4Q8WVI0 70 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CAPSLQ8WWF8 208 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 RGP1Q92546 391 aaPredicted RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 NEUROG1Q92886 237 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 SPTSSAQ969W0 71 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 PTX4Q96A99 478 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CPNE2Q96FN4 548 aaPredicted RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 ADGRG7Q96K78 797 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 OR2M2Q96R28 347 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ACTR6Q9GZN1 396 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 CXXC4Q9H2H0 198 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 RHBDL2Q9NX52 303 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 TAS2R8Q9NYW2 309 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 GHRLQ9UBU3 117 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 MCTS1Q9ULC4 181 aaKnown RBP4.29□□□□□ -1.72
SRP54-211ENST00000556445 SLC22A13Q9Y226 551 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 FLVCR1Q9Y5Y0 555 aa4.29□□□□□ -1.72
SRP54-211ENST00000556445 ZNF318Q5VUA4 2279 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 IGKV3D-15A0A087WSY6 115 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 A0A0G2JMP0 313 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 A0A0X1KG70 313 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 A0A1W2PNU3 283 aaPredicted RBP4.28□□□□□ -1.72
SRP54-211ENST00000556445 DHRS7CA6NNS2 312 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 G3V3Y1 287 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 MKRN2OSH3BPM6 223 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 GABARAPH6UMI1 98 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SULT1C2O00338 296 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 TIMM23O14925 209 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 ORC5O43913 435 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 CXCL13O43927 109 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 RAMP3O60896 148 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 KRT33AO76009 404 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 TOXO94900 526 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 DHFRP00374 187 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 MAS1P04201 325 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 CD37P11049 281 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 IGFBP3P17936 291 aaPredicted RBP4.28□□□□□ -1.72
SRP54-211ENST00000556445 RAB3AP20336 220 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 AADACP22760 399 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HTR2CP28335 458 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 DDOSTP39656 456 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
SRP54-211ENST00000556445 RPS27P42677 84 aaKnown RBP4.28□□□□□ -1.72
SRP54-211ENST00000556445 RAG2P55895 527 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 BTG1P62324 171 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HIST1H3AP68431 136 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 KLRB1Q12918 225 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SLC10A1Q14973 349 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 LY6G6FQ5SQ64 297 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 C1orf100Q5SVJ3 147 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HES5Q5TA89 166 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HIST2H3PS2Q5TEC6 136 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 FAM27BQ5VT28 67 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 RSBN1Q5VWQ0 802 aaPredicted RBP4.28□□□□□ -1.72
SRP54-211ENST00000556445 STUMQ69YW2 141 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SPINK14Q6IE38 97 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HIST2H3AQ71DI3 136 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 AKAP14Q86UN6 197 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SNX29P2Q8IUI4 249 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SLC22A24Q8N4F4 322 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 MDS2Q8NDY4 140 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 OR4M2Q8NGB6 313 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 OR52H1Q8NGJ2 320 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 OR52E5Q8NH55 327 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 OR10D3Q8NH80 312 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SYNPRQ8TBG9 265 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 HSD17B8Q92506 261 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 CREB3L1Q96BA8 519 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 AMELYQ99218 206 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 NEURL2Q9BR09 285 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 MAP1LC3CQ9BXW4 147 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 LINC00470Q9BZP3 86 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 PBOV1Q9GZY1 135 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 PLEKHA1Q9HB21 404 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 TMEM138Q9NPI0 162 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 FAM206AQ9NX38 181 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 SIGLEC8Q9NYZ4 499 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 IL36GQ9NZH8 169 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 NUBP2Q9Y5Y2 271 aa4.28□□□□□ -1.72
SRP54-211ENST00000556445 LHFPL6Q9Y693 200 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms