RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 TFAP2CQ92754 450 aa10.07□□□□□ -0.8
SNX6-207ENST00000556303 TOMM40LQ969M1 308 aa10.07□□□□□ -0.8
SNX6-207ENST00000556303 FKBP14Q9NWM8 211 aa10.07□□□□□ -0.8
SNX6-207ENST00000556303 RCC2Q9P258 522 aaKnown RBP10.07□□□□□ -0.8
SNX6-207ENST00000556303 FAM172BPA6NC97 362 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 MCRIP1C9JLW8 97 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 FGF16O43320 207 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 GNAO1P09471 354 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 CELP19835 753 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 SLC22A6Q4U2R8 563 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 ATAD3CQ5T2N8 411 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
SNX6-207ENST00000556303 LAIR2Q6ISS4 152 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 TRAT1Q6PIZ9 186 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 GLIPR1L1Q6UWM5 242 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 Q6ZS46 218 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 CENPVQ7Z7K6 275 aaPredicted RBP10.06□□□□□ -0.8
SNX6-207ENST00000556303 LYPD6Q86Y78 171 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 OR5AU1Q8NGC0 362 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 OR13C5Q8NGS8 318 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 OR10X1Q8NGY0 326 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 DERL3Q96Q80 235 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 OR14A2Q96R54 314 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 MRPS28Q9Y2Q9 187 aaKnown RBP10.06□□□□□ -0.8
SNX6-207ENST00000556303 MOB4Q9Y3A3 225 aa10.06□□□□□ -0.8
SNX6-207ENST00000556303 TRAV8-7A0A075B6U6 113 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 C15orf65H3BRN8 121 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 CCRL2O00421 344 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 MT-ND4P03905 459 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 GAPDHP04406 335 aaKnown RBP10.05□□□□□ -0.8
SNX6-207ENST00000556303 AMY1AP04745 511 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 AMY2AP04746 511 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 CD24P25063 80 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 SSTR5P35346 364 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 ZNF816Q0VGE8 651 aaPredicted RBP10.05□□□□□ -0.8
SNX6-207ENST00000556303 GPR50Q13585 617 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 ABCA11PQ4W5N1 156 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 C6orf183Q5T699 404 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 STEAP3Q658P3 488 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 AWAT2Q6E213 333 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 AHSA2Q719I0 299 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 GAPTQ8N292 157 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 JAGN1Q8N5M9 183 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 ZFP41Q8N8Y5 198 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 RFESDQ8TAC1 157 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 MYDGFQ969H8 173 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 ARL11Q969Q4 196 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 R3HDM4Q96D70 268 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 CITED2Q99967 270 aaPredicted RBP10.05□□□□□ -0.8
SNX6-207ENST00000556303 MND1Q9BWT6 205 aa10.05□□□□□ -0.8
SNX6-207ENST00000556303 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
SNX6-207ENST00000556303 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 ADARB2-AS1A8MUL3 147 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 AIPO00170 330 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 SC5DO75845 299 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 MAS1P04201 325 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 CDK1P06493 297 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 LPLP06858 475 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 UBBP0CG47 229 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 FUT3P21217 361 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 IL3RAP26951 378 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 LOXL3P58215 753 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 EBI3Q14213 229 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 UNQ9370/PRO34162Q6UXP9 181 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 MUL1Q969V5 352 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 ORAI1Q96D31 301 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 OR5M11Q96RB7 305 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 GFOD1Q9NXC2 390 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 SCN3BQ9NY72 215 aa10.04□□□□□ -0.8
SNX6-207ENST00000556303 A0A1W2PP11 408 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 MAGEA13PA6NCF6 341 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 PIN1P1O15428 100 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 SPINT2O43291 252 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 TXNL1O43396 289 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
SNX6-207ENST00000556303 BEAN1Q3B7T3 259 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 C6orf141Q5SZD1 244 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 UTF1Q5T230 341 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 GLT8D1Q68CQ7 371 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 RAB12Q6IQ22 244 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 NEK7Q8TDX7 302 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 PHYHIPQ92561 330 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 Q96M66 194 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 CST11Q9H112 138 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 ETAA1Q9NY74 926 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 ZNF581Q9P0T4 197 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 TRAPPC2LQ9UL33 140 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 LRRC42Q9Y546 428 aa10.03□□□□□ -0.8
SNX6-207ENST00000556303 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 PNMA8CA0A1B0GUJ8 204 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms