RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 A6NHS1 94 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 C17orf98A8MV24 154 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 LCE2BO14633 110 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 HPGDSO60760 199 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 NAPSAO96009 420 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 GNB3P16520 340 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 CCL3L1P16619 93 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 CDK2P24941 298 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 KIR2DS4P43632 304 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 BPIFB3P59826 476 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 ZNF273Q14593 569 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 MOGAT2Q3SYC2 334 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 PLAC9Q5JTB6 97 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 GPR157Q5UAW9 335 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 HACD4Q5VWC8 232 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 BAIAP2L2Q6UXY1 529 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 HEPN1Q6WQI6 88 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 OR10A7Q8NGE5 316 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 OR13A1Q8NGR1 328 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 OR4K15Q8NH41 348 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 SETD6Q8TBK2 473 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 CCDC107Q8WV48 283 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 ARL11Q969Q4 196 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 UPRTQ96BW1 309 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 BEX2Q9BXY8 128 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 TMPRSS13Q9BYE2 586 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 SLIRPQ9GZT3 109 aaKnown RBP6.28□□□□□ -1.4
TDP1-214ENST00000556063 SIRPDQ9H106 197 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 AUNIPQ9H7T9 357 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 UNKLQ9H9P5 680 aaKnown RBP6.28□□□□□ -1.4
TDP1-214ENST00000556063 ZMAT3Q9HA38 289 aaKnown RBP6.28□□□□□ -1.4
TDP1-214ENST00000556063 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
TDP1-214ENST00000556063 CALYQ9NYX4 217 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 CDC42EP3Q9UKI2 254 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 MRPS7Q9Y2R9 242 aaKnown RBP6.28□□□□□ -1.4
TDP1-214ENST00000556063 TMEM235A6NFC5 223 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 CTDSP2O14595 271 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 EIF4EP06730 217 aaKnown RBP6.27□□□□□ -1.41
TDP1-214ENST00000556063 MELTFP08582 738 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 ELK1P19419 428 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 DTYMKP23919 212 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 PRSS3P35030 304 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 CBX5P45973 191 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 TAS2R20P59543 309 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 ZNF260Q3ZCT1 412 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 CHRFAM7AQ494W8 412 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 VMO1Q7Z5L0 202 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 OR52M1Q8NGK5 317 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 OR13D1Q8NGV5 346 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 MRPL30Q8TCC3 161 aaKnown RBP6.27□□□□□ -1.41
TDP1-214ENST00000556063 DYRK2Q92630 601 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 GALMQ96C23 342 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 DIRAS2Q96HU8 199 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 NXF2Q9GZY0 626 aaKnown RBP6.27□□□□□ -1.41
TDP1-214ENST00000556063 GSX1Q9H4S2 264 aaPredicted RBP6.27□□□□□ -1.41
TDP1-214ENST00000556063 LINC00574Q9H8X3 128 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 TAF9BQ9HBM6 251 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 ZNF286AQ9HBT8 521 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 SIRT7Q9NRC8 400 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 IDI2-AS1Q9NZ38 188 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 GNG12Q9UBI6 72 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 EXTL2Q9UBQ6 330 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 KCNK7Q9Y2U2 307 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 SESN1Q9Y6P5 492 aa6.27□□□□□ -1.41
TDP1-214ENST00000556063 TEP1Q99973 2627 aaKnown RBP6.27□□□□□ -1.41
TDP1-214ENST00000556063 TRAV39A0A0B4J263 110 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 TRAV40A0A0B4J280 105 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 MEX3AA1L020 520 aaKnown RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 TRDCB7Z8K6 153 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 C12orf77C9JDV5 145 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 NPIPB11E5RHQ5 1161 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 SDCBPO00560 298 aaPredicted RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 TOR1AO14656 332 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 RGS11O94810 467 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 HBZP02008 142 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 FCGR3AP08637 254 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CTXN2P0C2S0 81 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CGB3P0DN86 165 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CGB7P0DN87 165 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 MMP9P14780 707 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 RCC1P18754 421 aaPredicted RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 FPR2P25090 351 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 NFYBP25208 207 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 UBE2E1P51965 193 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 PRRX1P54821 245 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 DLX6P56179 175 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 LGALS4P56470 323 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 MRPS10P82664 201 aaKnown RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
TDP1-214ENST00000556063 C17orf58Q2M2W7 97 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 Q3ZCU0 254 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 STEAP3Q658P3 488 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 ZNF880Q6PDB4 577 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 CNIH2Q6PI25 160 aa6.26□□□□□ -1.41
TDP1-214ENST00000556063 ZNF782Q6ZMW2 699 aaPredicted RBP6.26□□□□□ -1.41
TDP1-214ENST00000556063 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms