RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, human

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC2-208	ENST00000556009	OR13A1	Q8NGR1	328 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	OR5AK2	Q8NH90	309 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	HAVCR2	Q8TDQ0	301 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	CHPT1	Q8WUD6	406 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	CPNE2	Q96FN4	548 aa	Predicted RBP	14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	MND1	Q9BWT6	205 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	IDI2-AS1	Q9NZ38	188 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	KIF25	Q9UIL4	384 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009	PSG11	Q9UQ72	335 aa		14.03	□□□□□ -0.16
NPC2-208	ENST00000556009		A0A1W2PPI3	338 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	WI2-2373I1.2	A0A1W2PRP0	233 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009		E9PI62	339 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	MRPS14	O60783	128 aa	Known RBP	14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	TNFAIP8	O95379	198 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	GLP1R	P43220	463 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	MAP2K4	P45985	399 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	WNT4	P56705	351 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	KHDC1L	Q5JSQ8	128 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	RSBN1	Q5VWQ0	802 aa	Predicted RBP	14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	ASCL4	Q6XD76	172 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	ETV3L	Q6ZN32	361 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	MRPL41	Q8IXM3	137 aa	Known RBP	14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	OR8H3	Q8N146	312 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	ZNF485	Q8NCK3	441 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	NR1H4	Q96RI1	486 aa	Predicted RBP	14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	ZFP57	Q9NU63	452 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	BABAM2	Q9NXR7	383 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	DHDH	Q9UQ10	334 aa		14.02	□□□□□ -0.17
NPC2-208	ENST00000556009	RAB3A	P20336	220 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	THBS3	P49746	956 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	RPL23A	P62750	156 aa	Known RBP	14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	DEFB121	Q5J5C9	76 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	ZNF773	Q6PK81	442 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	DRAM1	Q8N682	238 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	C5orf56	Q8N8D9	126 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	OR56B4	Q8NH76	319 aa		14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	MCRIP2	Q9BUT9	160 aa	Known RBP	14.01	□□□□□ -0.17
NPC2-208	ENST00000556009	GABRP	O00591	440 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	HSPB6	O14558	160 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	MAGEB3	O15480	346 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	TMEM11	P17152	192 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	GZMH	P20718	246 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	GTF2A1	P52655	376 aa	Predicted RBP	14	□□□□□ -0.17
NPC2-208	ENST00000556009	DOC2B	Q14184	412 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	EBI3	Q14213	229 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	C11orf87	Q6NUJ2	197 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	ZNF329	Q86UD4	541 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	SPART	Q8N0X7	666 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	SVOP	Q8N4V2	548 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	COMMD1	Q8N668	190 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	PLPPR1	Q8TBJ4	325 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	DPF1	Q92782	380 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	LEAP2	Q969E1	77 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	PDCD1LG2	Q9BQ51	273 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	IFT22	Q9H7X7	185 aa		14	□□□□□ -0.17
NPC2-208	ENST00000556009	LSM2	Q9Y333	95 aa	Known RBP	14	□□□□□ -0.17
NPC2-208	ENST00000556009	LALBA	P00709	142 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	IGHV3-7	P01780	117 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	IGHG2	P01859	326 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	MYCNOS	P40205	109 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	DIAPH2-AS1	Q14236	149 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	HES1	Q14469	280 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	SPHAR	Q15513	63 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	MED22	Q15528	200 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	TBCE	Q15813	527 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	NHLRC3	Q5JS37	347 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	XAF1	Q6GPH4	301 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	RPL22L1	Q6P5R6	122 aa	Known RBP	13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	OR2W3	Q7Z3T1	314 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	RFESD	Q8TAC1	157 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	MRGPRD	Q8TDS7	321 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	TNFAIP8L1	Q8WVP5	186 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	TSEN15	Q8WW01	171 aa	Known RBP	13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	ACOT13	Q9NPJ3	140 aa		13.99	□□□□□ -0.17
NPC2-208	ENST00000556009	SERPINE3	A8MV23	424 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	HOXD3	P31249	432 aa	Predicted RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	TAS2R43	P59537	309 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	SLC35B1	P78383	322 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	RSU1	Q15404	277 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	PIGY	Q3MUY2	71 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	CCDC58	Q4VC31	144 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	ZFP41	Q8N8Y5	198 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	TSPAN14	Q8NG11	270 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	NOL4L	Q96MY1	436 aa	Predicted RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	GPER1	Q99527	375 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	P2RX4	Q99571	388 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	DPCD	Q9BVM2	203 aa	Predicted RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	IL36G	Q9NZH8	169 aa		13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	ZMAT5	Q9UDW3	170 aa	Known RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.98	□□□□□ -0.17
NPC2-208	ENST00000556009	OGG1	O15527	345 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	IGKV1D-33	P01593	117 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	IGKV1-33	P01594	117 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	GAPDH	P04406	335 aa	Known RBP	13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	SSTR5	P35346	364 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	HNF4G	Q14541	408 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	LTC4S	Q16873	150 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	ZNF367	Q7RTV3	350 aa		13.97	□□□□□ -0.17
NPC2-208	ENST00000556009	SATL1	Q86VE3	508 aa		13.97	□□□□□ -0.17

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