RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 DMKNQ6E0U4 476 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-220ENST00000555612 SLC24A4Q8NFF2 622 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 OR10G4Q8NGN3 311 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 OR10G9Q8NGN4 311 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 OR10G7Q8NGN6 311 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 GUCD1Q96NT3 240 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 DCTN5Q9BTE1 182 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 PF4P02776 101 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 GAPDHP04406 335 aaKnown RBP7.15□□□□□ -1.27
SYNE2-220ENST00000555612 EIF4EBP2Q13542 120 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-220ENST00000555612 LY6DQ14210 128 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 NTNG2Q96CW9 530 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 SPSB2Q99619 263 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 ZDHHC8Q9ULC8 765 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 CCL27Q9Y4X3 112 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 LTBP1Q14766 1721 aa7.15□□□□□ -1.27
SYNE2-220ENST00000555612 TRIP11Q15643 1979 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 NQO2P16083 231 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 GZMKP49863 264 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 MVDP53602 400 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 TCTE3Q8IZS6 198 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 SIGLECL1Q8N7X8 197 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 STARD4Q96DR4 205 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 NPAS1Q99742 590 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF552Q9H707 407 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 IGHV3OR16-12A0A075B7B8 117 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 MGST3O14880 152 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 RAB5AP20339 215 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 RPL30P62888 115 aaKnown RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 OR2C3Q8N628 320 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 ADAT3Q96EY9 351 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 RPL36A-HNRNPH2H7BZ11 118 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 PPYP01298 95 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 OR1L8Q8NGR8 309 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 BRWD3Q6RI45 1802 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 PPIAL4CA0A0B4J2A2 164 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 TMEM229AB2RXF0 380 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 SYNGR2O43760 224 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 CTSDP07339 412 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 PPIAL4GP0DN37 164 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 FGF8P55075 233 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 ZNF273Q14593 569 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 NHLRC2Q8NBF2 726 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 OR4X1Q8NH49 305 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 SRXN1Q9BYN0 137 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 ASXL3Q9C0F0 2248 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 CHST1O43916 411 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 CEBPDP49716 269 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 DCAF12L2Q5VW00 463 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 MRGPRFQ96AM1 343 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 NKX6-2Q9C056 277 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-220ENST00000555612 OR2W1Q9Y3N9 320 aa7.14□□□□□ -1.27
SYNE2-220ENST00000555612 ORM1P02763 201 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 ZP4Q12836 540 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 UNQ5815/PRO19632Q6UWF5 114 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 TIMP4Q99727 224 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 OR4C45A6NMZ5 311 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 SCAND1P57086 179 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 TUSC1Q2TAM9 212 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 CEACAM21Q3KPI0 293 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 LINC00596Q86U02 117 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 FAM219AQ8IW50 185 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 FBLIM1Q8WUP2 373 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 SIGLEC12Q96PQ1 595 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 YAE1D1Q9NRH1 226 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 METTL1Q9UBP6 276 aaKnown RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 OR51B2Q9Y5P1 312 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 LOC105371242A0A075B767 164 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 IGHV1-69-2A0A0G2JMI3 117 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 GATCO43716 136 aaKnown RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 CA11O75493 328 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 FAM27E3Q08E93 113 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 FAM162BQ5T6X4 162 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 CLEC9AQ6UXN8 241 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 HDHD3Q9BSH5 251 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 RAB29O14966 203 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 OGG1O15527 345 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 ADAP1O75689 374 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 MIDNQ504T8 468 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 SLC25A42Q86VD7 318 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 BVESQ8NE79 360 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 OR4A4PQ8NGN8 299 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 ANGPTL6Q8NI99 470 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 ELOVL5Q9NYP7 299 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 MIOXQ9UGB7 285 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 CACNA1GO43497 2377 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 J3QR06 171 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 TO15178 435 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 DXOO77932 396 aaKnown RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 PGA4P0DJD7 388 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 RBM11P57052 281 aaKnown RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 C10orf111Q8N326 155 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 RNF2Q99496 336 aa7.13□□□□□ -1.27
SYNE2-220ENST00000555612 TECRQ9NZ01 308 aaKnown RBP7.13□□□□□ -1.27
SYNE2-220ENST00000555612 CST4P01036 141 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 MGPP08493 103 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 ATP6V1FQ16864 119 aa7.12□□□□□ -1.27
SYNE2-220ENST00000555612 C10orf113Q5VZT2 155 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms