RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 hCG_1809904A0A1W2PP81 198 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 A0A1W2PPE2 198 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 A0A1W2PR64 198 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 A0A1W2PRV1 198 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 KCNJ3P48549 501 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 MRPS15P82914 257 aaKnown RBP16.84■□□□□ 0.29
FOXN3-209ENST00000555353 LSAMPQ13449 338 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 CDNFQ49AH0 187 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 RBMS3Q6XE24 437 aaKnown RBP16.84■□□□□ 0.29
FOXN3-209ENST00000555353 BRD3OSQ6XYD6 125 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 C6orf201Q7Z4U5 140 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 Q8N7P7 452 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 SUMF2Q8NBJ7 301 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 DPCDQ9BVM2 203 aaPredicted RBP16.84■□□□□ 0.29
FOXN3-209ENST00000555353 PPA2Q9H2U2 334 aa16.84■□□□□ 0.29
FOXN3-209ENST00000555353 A0A0A6YYJ9 748 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 TRAV24A0A0B4J272 114 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 hADV38S2A0JD32 116 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 SLC33A1O00400 549 aaPredicted RBP16.83■□□□□ 0.28
FOXN3-209ENST00000555353 GNB3P16520 340 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 MEF2CQ06413 473 aaPredicted RBP16.83■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF273Q14593 569 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 PNLIPRP3Q17RR3 467 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 KIAA2026Q5HYC2 2103 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 PLAC9Q5JTB6 97 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 C9orf139Q6ZV77 190 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 PDZD9Q8IXQ8 264 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 BCL6BQ8N143 479 aaPredicted RBP16.83■□□□□ 0.28
FOXN3-209ENST00000555353 WDR12Q9GZL7 423 aaKnown RBP16.83■□□□□ 0.28
FOXN3-209ENST00000555353 AUNIPQ9H7T9 357 aa16.83■□□□□ 0.28
FOXN3-209ENST00000555353 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.83■□□□□ 0.282e-6■■■■■ 35.4
FOXN3-209ENST00000555353 IGHV1-69DA0A0B4J2H0 117 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 FUOMA2VDF0 154 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 MFNGO00587 321 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 IGHV1-69P01742 117 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 MRPS10P82664 201 aaKnown RBP16.82■□□□□ 0.28
FOXN3-209ENST00000555353 GUCA2AQ02747 115 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 ARFRP1Q13795 201 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF260Q3ZCT1 412 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 NCR3LG1Q68D85 454 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 SNX29P2Q8IUI4 249 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 TPRX1Q8N7U7 411 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 JMJD8Q96S16 334 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 ZMAT3Q9HA38 289 aaKnown RBP16.82■□□□□ 0.28
FOXN3-209ENST00000555353 AKIP1Q9NQ31 210 aa16.82■□□□□ 0.28
FOXN3-209ENST00000555353 HSPB6O14558 160 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 CCL3L1P16619 93 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 PRTN3P24158 256 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 ERP29P30040 261 aaKnown RBP16.81■□□□□ 0.28
FOXN3-209ENST00000555353 P2RX3P56373 397 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 GNG2P59768 71 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 MADCAM1Q13477 382 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF846Q147U1 533 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 RUSC1-AS1Q66K80 236 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 SOSTQ9BQB4 213 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 FAAP24Q9BTP7 215 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 UNKLQ9H9P5 680 aaKnown RBP16.81■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF581Q9P0T4 197 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 V9GYH0 126 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 MEX3AA1L020 520 aaKnown RBP16.81■□□□□ 0.28
FOXN3-209ENST00000555353 TMEM235A6NFC5 223 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 CA11O75493 328 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 HLA-DQB1P01920 261 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 CSN2P05814 226 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 MELTFP08582 738 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 CD3GP09693 182 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 PRSS3P35030 304 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 DLX1P56177 255 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 PRB3Q04118 309 aaPredicted RBP16.81■□□□□ 0.28
FOXN3-209ENST00000555353 PYDC2Q56P42 97 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 HACD4Q5VWC8 232 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 TRAPPC6BQ86SZ2 158 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF714Q96N38 554 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 SULT4A1Q9BR01 284 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 ETAA1Q9NY74 926 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 LINC00312Q9Y6C7 94 aa16.81■□□□□ 0.28
FOXN3-209ENST00000555353 UBE2QL1A1L167 161 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF728P0DKX0 622 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 HILS1P60008 231 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 SRSF2Q01130 221 aaKnown RBP16.8■□□□□ 0.28
FOXN3-209ENST00000555353 AESQ08117 197 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 ATXN7L3Q14CW9 347 aaPredicted RBP16.8■□□□□ 0.28
FOXN3-209ENST00000555353 KRBOX4Q5JUW0 171 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 BRICD5Q6PL45 260 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 SIGLECL1Q8N7X8 197 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 CMSS1Q9BQ75 279 aaKnown RBP16.8■□□□□ 0.28
FOXN3-209ENST00000555353 RIMS4Q9H426 269 aaPredicted RBP16.8■□□□□ 0.28
FOXN3-209ENST00000555353 SCPEP1Q9HB40 452 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 ING3Q9NXR8 418 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 KCNK7Q9Y2U2 307 aa16.8■□□□□ 0.28
FOXN3-209ENST00000555353 RNASEK-C17orf49H0YIS7 233 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 SULT1C2O00338 296 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 CTDSPLO15194 276 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 KLRD1Q13241 179 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 MFSD4AQ8N468 514 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 GDPD1Q8N9F7 314 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 TNFRSF14Q92956 283 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 ABHD1Q96SE0 405 aa16.79■□□□□ 0.28
FOXN3-209ENST00000555353 SOX21Q9Y651 276 aaPredicted RBP16.79■□□□□ 0.28
FOXN3-209ENST00000555353 TRGV10A0A0A0MS01 117 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms