RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF880Q6PDB4 577 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 WFDC11Q8NEX6 87 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 TMPRSS13Q9BYE2 586 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 MYOZ1Q9NP98 299 aaPredicted RBP8.91□□□□□ -0.98
TDP1-211ENST00000555178 BEX4Q9NWD9 120 aaPredicted RBP8.91□□□□□ -0.98
TDP1-211ENST00000555178 SLC25A10Q9UBX3 287 aaPredicted RBP8.91□□□□□ -0.98
TDP1-211ENST00000555178 TLN2Q9Y4G6 2542 aa8.91□□□□□ -0.98
TDP1-211ENST00000555178 MGST3O14880 152 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 ZFP36P26651 326 aaKnown RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 DLX1P56177 255 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 AP3S2P59780 193 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 CHRFAM7AQ494W8 412 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 RNASE10Q5GAN6 216 aaKnown RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 Q5PR19 223 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 SLC35E4Q6ICL7 350 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 PEG10Q86TG7 708 aaKnown RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 CIARTQ8N365 385 aaPredicted RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 OR5AP2Q8NGF4 316 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 CHPT1Q8WUD6 406 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 RAB1CQ92928 201 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 MRGPRFQ96AM1 343 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 MBD6Q96DN6 1003 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 ZNF286AQ9HBT8 521 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 C19orf12Q9NSK7 152 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 TAS2R8Q9NYW2 309 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 EHFQ9NZC4 300 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.982e-9■■■■■ 31.2
TDP1-211ENST00000555178 ODAMA1E959 279 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 FAM157AC9JC47 383 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 C12orf77C9JDV5 145 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 H3BUI4 141 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 PTTG1O95997 202 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 RPS2P15880 293 aaKnown RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 SLC6A1P30531 599 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 P2RX3P56373 397 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 ARPC4P59998 168 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 PRB3Q04118 309 aaPredicted RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 PLA1AQ53H76 456 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 ZNF782Q6ZMW2 699 aaPredicted RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 SLC36A1Q7Z2H8 476 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 OR5H2Q8NGV7 314 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 OR1L1Q8NH94 360 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 ENKURQ8TC29 256 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 IL1F10Q8WWZ1 152 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 UPRTQ96BW1 309 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 KIRREL1Q96J84 757 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 SEBOXQ9HB31 216 aaPredicted RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 MBNL3Q9NUK0 354 aaKnown RBP8.9□□□□□ -0.98
TDP1-211ENST00000555178 FLVCR2Q9UPI3 526 aa8.9□□□□□ -0.98
TDP1-211ENST00000555178 TRBV6-6A0A0A6YYG2 114 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 FAM240BA0A1B0GVZ2 78 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 BET1O15155 118 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 FABP7O15540 132 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 OMGP23515 440 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 RAB25P57735 213 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 HLA-DRB3P79483 266 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 TRIM16LQ309B1 348 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 CLEC2AQ6UVW9 174 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 CCBE1Q6UXH8 406 aaPredicted RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 OVCH2Q7RTZ1 564 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 RFESDQ8TAC1 157 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 H1FXQ92522 213 aaKnown RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 TIMD4Q96H15 378 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 PATZ1Q9HBE1 687 aaKnown RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 TAF9BQ9HBM6 251 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 OR1A1Q9P1Q5 309 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 ABCA1O95477 2261 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 CSPG4Q6UVK1 2322 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 TRAV6A0A075B6T7 132 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 CENPXA8MT69 81 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 TRDCB7Z8K6 153 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 RNF223E7ERA6 249 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 F5H0A9 414 aaPredicted RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 IGHV2-5P01817 119 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 NFYAP23511 347 aaPredicted RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 OR3A3P47888 321 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 KCNJ3P48549 501 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 ZNF273Q14593 569 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 LTC4SQ16873 150 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 IDO2Q6ZQW0 420 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 OR13C8Q8NGS7 320 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 PPP1R35Q8TAP8 253 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 CREB3L1Q96BA8 519 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 Q96MF0 132 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 PARP12Q9H0J9 701 aaKnown RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 DNTTIP1Q9H147 329 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 RIMS4Q9H426 269 aaPredicted RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 LPAR2Q9HBW0 351 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 KAAG1Q9UBP8 84 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 ZNF107Q9UII5 783 aaPredicted RBP8.89□□□□□ -0.99
TDP1-211ENST00000555178 ITGB1BP2Q9UKP3 347 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 EDARQ9UNE0 448 aa8.89□□□□□ -0.99
TDP1-211ENST00000555178 hCG_2014768A0A024R1R8 64 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 IGHV3-43A0A0B4J1X8 118 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 KIAA1324LA8MWY0 1029 aaPredicted RBP8.88□□□□□ -0.99
TDP1-211ENST00000555178 C22orf46C9J442 243 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 NDUFB3O43676 98 aa8.88□□□□□ -0.99
TDP1-211ENST00000555178 OR5H8P0DN80 308 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms