RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LRRC37A3O60309 1634 aa6.09□□□□□ -1.43
SYNE2-216ENST00000555002 TRDCB7Z8K6 153 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 TCF21O43680 179 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 PDE6DO43924 150 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 FCGR3AP08637 254 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 CGB2Q6NT52 195 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 VSTM2AQ8TAG5 236 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 COPS9Q8WXC6 57 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 SLC35B3Q9H1N7 401 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 UPK1AO00322 258 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 FAM157CP0CG43 387 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 PGA3P0DJD8 388 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 MAS1LP35410 378 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 SSBP1Q04837 148 aaKnown RBP6.09□□□□□ -1.44
SYNE2-216ENST00000555002 AANATQ16613 207 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 ZBTB37Q5TC79 503 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 HSF4Q9ULV5 492 aa6.09□□□□□ -1.44
SYNE2-216ENST00000555002 A1L4Q6 167 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 CD1EP15812 388 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TOMM34Q15785 309 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM167BQ9NRX6 74 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TMED3Q9Y3Q3 217 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM56-RWDD3S4R434 201 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 HYAL3O43820 417 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 OTX1P32242 354 aaPredicted RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 OR2T10Q8NGZ9 312 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 MAVSQ7Z434 540 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 ADTRPQ96IZ2 230 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 PITPNC1Q9UKF7 332 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 KCNE3Q9Y6H6 103 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 ZNF117Q03924 483 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 SRSF5Q13243 272 aaKnown RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 MRPL58Q14197 206 aaKnown RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 CCDC144NLQ6NUI1 221 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 RASL12Q9NYN1 266 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 HPXP02790 462 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 SSPNQ14714 243 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 HIKESHIQ53FT3 197 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TSPAN32Q96QS1 320 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TINAGQ9UJW2 476 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 YBX1P67809 324 aaKnown RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 CLDN10P78369 228 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 TTC32Q5I0X7 151 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 PP6455Q8WZ26 134 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 C11orf68Q9H3H3 251 aaKnown RBP6.08□□□□□ -1.44
SYNE2-216ENST00000555002 MAST2Q6P0Q8 1798 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 GABRA1P14867 456 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 STARD6P59095 220 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 DIRC2Q96SL1 478 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 LRRK1Q38SD2 2015 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 IGHV3-72A0A0B4J1Y9 119 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 SKP2Q13309 424 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 LINC00303Q3SY05 128 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 FAHD1Q6P587 224 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 FCMRO60667 390 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 SPNP16150 400 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 MDP1Q86V88 176 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 PRRX2Q99811 253 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 ZFP64Q9NPA5 681 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 KLK11Q9UBX7 282 aa6.08□□□□□ -1.44
SYNE2-216ENST00000555002 PRR32B1ATL7 298 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 B4E171 279 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 KBTBD11O94819 623 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 FUCA1P04066 466 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GCAP28676 217 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 MAGEA5P43359 124 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CXorf66Q5JRM2 361 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM78Q5T7P6 136 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 FAM219AQ8IW50 185 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 OR1L8Q8NGR8 309 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 TMEM38BQ9NVV0 291 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 TNFSF14O43557 240 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 VSIG10L2P0DP72 767 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 MARVELD3Q96A59 401 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GSX2Q9BZM3 304 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PRNDQ9UKY0 176 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 IGKV6D-21A0A0A0MT36 114 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CTLA4P16410 223 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GPR6P46095 362 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RHBDD2Q6NTF9 364 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 ASCL5Q7RTU5 278 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CADM4Q8NFZ8 388 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SPSB1Q96BD6 273 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 RBFOX3A6NFN3 312 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GABRG2P18507 467 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PAXXQ9BUH6 204 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PIPOXQ9P0Z9 390 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CD99P14209 185 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 HCP5Q6MZN7 132 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 CLRN3Q8NCR9 226 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 GPA33Q99795 319 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SLC25A33Q9BSK2 321 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 DUSP21Q9H596 190 aa6.07□□□□□ -1.44
SYNE2-216ENST00000555002 SOX21Q9Y651 276 aaPredicted RBP6.07□□□□□ -1.44
SYNE2-216ENST00000555002 HYPMO75409 117 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms