RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 ZNF273Q14593 569 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 C6orf183Q5T699 404 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 DCAF12L2Q5VW00 463 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 PYHIN1Q6K0P9 492 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 FAHD2BQ6P2I3 314 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-215ENST00000554997 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 Q6ZS49 121 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 TCF23Q7RTU1 214 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 TRAPPC6BQ86SZ2 158 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 GLCCI1Q86VQ1 547 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 KIR3DL3Q8N743 410 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 OR4M2Q8NGB6 313 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 OR13A1Q8NGR1 328 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 FAHD2AQ96GK7 314 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF714Q96N38 554 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 HDHD3Q9BSH5 251 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-215ENST00000554997 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 SCPEP1Q9HB40 452 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 Q9N2K0 584 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 ITPR3Q14573 2671 aa8.39□□□□□ -1.07
SYNE2-215ENST00000554997 TRAV39A0A0B4J263 110 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 MEIOCA2RUB1 952 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 TRDCB7Z8K6 153 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 NPIPB11E5RHQ5 1161 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 C15orf65H3BRN8 121 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 J3QLI3 93 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 CTDSPLO15194 276 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 CD5LO43866 347 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 FCGR3AP08637 254 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 PTHLHP12272 177 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 MRPS10P82664 201 aaKnown RBP8.38□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF45Q02386 682 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 IL18Q14116 193 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 SPANXN2Q5MJ10 180 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 FAM131AQ6UXB0 335 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 Q6ZPA2 131 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 MOB1BQ7L9L4 216 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 HOGA1Q86XE5 327 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 SNX29P2Q8IUI4 249 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 Q8N7P7 452 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 OR10A7Q8NGE5 316 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 MRGPRDQ8TDS7 321 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 GPX8Q8TED1 209 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 FCAMRQ8WWV6 532 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 ARL11Q969Q4 196 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 ST6GALNAC5Q9BVH7 336 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 C7orf69Q9H7B7 122 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
SYNE2-215ENST00000554997 TAF9BQ9HBM6 251 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 RAB9BQ9NP90 201 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 ZNF230Q9UIE0 474 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-215ENST00000554997 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
SYNE2-215ENST00000554997 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 MEX3AA1L020 520 aaKnown RBP8.37□□□□□ -1.07
SYNE2-215ENST00000554997 C12orf77C9JDV5 145 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 SPINT2O43291 252 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 TOX4O94842 621 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 LPLP06858 475 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 MMP9P14780 707 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 CCL3L1P16619 93 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 PRTN3P24158 256 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 KRTAP1-1Q07627 177 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 METTL11BQ5VVY1 283 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 HEPN1Q6WQI6 88 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 RFESDQ8TAC1 157 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 SETD6Q8TBK2 473 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 NUDCD2Q8WVJ2 157 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 METTL8Q9H825 291 aaKnown RBP8.37□□□□□ -1.07
SYNE2-215ENST00000554997 CALYQ9NYX4 217 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 ONECUT1Q9UBC0 465 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 V9GYH0 126 aa8.37□□□□□ -1.07
SYNE2-215ENST00000554997 GABARAPH6UMI1 98 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 F2RL2O00254 374 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GSTZ1O43708 216 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-215ENST00000554997 RBBP9O75884 186 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 LY6G6DO95868 133 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 HBZP02008 142 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 SCTP09683 121 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GSTT2P0CG29 244 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GSTT2BP0CG30 244 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 IGHV1-8P0DP01 117 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 NAT1P18440 290 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 FPR2P25090 351 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GLP1RP43220 463 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 KIR2DS4P43632 304 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 HTD2P86397 168 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 MADCAM1Q13477 382 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 KIR2DS1Q14954 304 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 HMGN3Q15651 99 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 OR52W1Q6IF63 320 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 LURAP1LQ8IV03 231 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 LYSMD2Q8IV50 215 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 OR52M1Q8NGK5 317 aa8.36□□□□□ -1.07
SYNE2-215ENST00000554997 GALMQ96C23 342 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms