RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 LMX1AQ8TE12 382 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 PECRQ9BY49 303 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 CSTL1Q9H114 145 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 SLC45A2Q9UMX9 530 aa13.53□□□□□ -0.24
SYNE3-203ENST00000554873 A0A1W2PPC4 97 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 CEBPZOSA8MTT3 80 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 CD33P20138 364 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 TPPP2P59282 170 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 RPL23P62829 140 aaKnown RBP13.52□□□□□ -0.24
SYNE3-203ENST00000554873 CPEB2Q7Z5Q1 589 aaKnown RBP13.52□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF441Q8N8Z8 693 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 ZNF738Q8NE65 137 aa13.52□□□□□ -0.24
SYNE3-203ENST00000554873 TRAPPC6AO75865 159 aa13.52□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF728P0DKX0 622 aa13.52□□□□□ -0.25
SYNE3-203ENST00000554873 DAP3P51398 398 aaKnown RBP13.52□□□□□ -0.25
SYNE3-203ENST00000554873 KLHL24Q6TFL4 600 aa13.52□□□□□ -0.25
SYNE3-203ENST00000554873 MAGT1Q9H0U3 335 aa13.52□□□□□ -0.25
SYNE3-203ENST00000554873 COX11Q9Y6N1 276 aa13.52□□□□□ -0.25
SYNE3-203ENST00000554873 ASXL3Q9C0F0 2248 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 ANKUB1A6NFN9 424 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 FOXI3A8MTJ6 420 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-203ENST00000554873 KBTBD11O94819 623 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 ONECUT2O95948 504 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 BLVRBP30043 206 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-203ENST00000554873 LCN2P80188 198 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 BAXQ07812 192 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 OR4C5Q8NGB2 326 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 OR51E1Q8TCB6 317 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 WIPI2Q9Y4P8 454 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 MYO15AQ9UKN7 3530 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 GCH1P30793 250 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-203ENST00000554873 TLE3Q04726 772 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 TSPO2Q5TGU0 170 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-203ENST00000554873 VN1R17PQ8TDU5 208 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 MBD3L1Q8WWY6 194 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 RLN3Q8WXF3 142 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 NKX2-4Q9H2Z4 354 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 LAMTOR2Q9Y2Q5 125 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
SYNE3-203ENST00000554873 IGHV2-70DA0A0C4DH43 119 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 CDS2O95674 445 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 IFNA1P01562 189 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 FOXL2P58012 376 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
SYNE3-203ENST00000554873 TMEM41BQ5BJD5 291 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 OR2V1Q8NHB1 315 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 TMEM234Q8WY98 164 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 CHRNA10Q9GZZ6 450 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 MANBALQ9NQG1 85 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 HSPB7Q9UBY9 170 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 RPH3ALQ9UNE2 315 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 TRIOO75962 3097 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 CST7O76096 145 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 OPN1LWP04000 364 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 BIDP55957 195 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 OR1L3Q8NH93 324 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 ATP5SQ99766 215 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
SYNE3-203ENST00000554873 LRRC3CA6NJW4 275 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 GLI4P10075 376 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 RTP5Q14D33 572 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 TMEM217Q8N7C4 229 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 GPER1Q99527 375 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 UQCR10Q9UDW1 63 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 SSSCA1O60232 199 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
SYNE3-203ENST00000554873 RPL19P84098 196 aaKnown RBP13.49□□□□□ -0.25
SYNE3-203ENST00000554873 MORN2Q502X0 79 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 OR5L1Q8NGL2 311 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 LIME1Q9H400 295 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 UNC13CQ8NB66 2214 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 SHISA8B8ZZ34 492 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 M0QZ24 198 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 MSTNO14793 375 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 FBLP22087 321 aaKnown RBP13.49□□□□□ -0.25
SYNE3-203ENST00000554873 ANOS1P23352 680 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 CDKN1AP38936 164 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms