RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ARG2P78540 354 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 H3F3AP84243 136 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 SLC25A53Q5H9E4 307 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 C10orf128Q5T292 105 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 HIST2H3PS2Q5TEC6 136 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 TMEM105Q8N8V8 129 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 RAB39BQ96DA2 213 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 PFDN5Q99471 154 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 OR1A1Q9P1Q5 309 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 TMED3Q9Y3Q3 217 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 COL6A6A6NMZ7 2263 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 K7ESF4 209 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 NXPH2O95156 264 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 SRD5A2P31213 254 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 SSX9Q7RTT3 188 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 TMPRSS5Q9H3S3 457 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 HSF4Q9ULV5 492 aa10.2□□□□□ -0.78
XRCC3-208ENST00000554811 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 UBE2L5PA0A1B0GUS4 154 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 RHBDL1O75783 438 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 RND3P61587 244 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 DLK1P80370 383 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 IL11RAQ14626 422 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 HIST3H3Q16695 136 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 DEFB123Q8N688 67 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 CT55Q8WUE5 264 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 IMMP1LQ96LU5 166 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 PLEKHF2Q9H8W4 249 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 BOKQ9UMX3 212 aaPredicted RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 PLCE1Q9P212 2302 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 TOX3O15405 576 aaPredicted RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 CST2P09228 141 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ALDH3B1P43353 468 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 NKX6-1P78426 367 aaPredicted RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 EDDM3AQ14507 147 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ZNF239Q16600 458 aaKnown RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ALKBH6Q3KRA9 238 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ATP1A1-AS1Q5TC04 95 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ZNF385CQ66K41 422 aaPredicted RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ZNF880Q6PDB4 577 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 C15orf54Q8N8G6 183 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 MOB3AQ96BX8 217 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 PROK2Q9HC23 129 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 B4GALT7Q9UBV7 327 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 TGIF2-C20orf24A0A0A6YYL0 155 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 CD5P06127 495 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 DEFA4P12838 97 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 CRIP3Q6Q6R5 217 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 OR10D4PQ8NGN7 298 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 TMEM171Q8WVE6 324 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 MSI2Q96DH6 328 aaKnown RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 RBMXL1Q96E39 390 aaKnown RBP10.19□□□□□ -0.78
XRCC3-208ENST00000554811 BOD1Q96IK1 185 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 OBP2BQ9NPH6 170 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 GLRX2Q9NS18 164 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 GAB2Q9UQC2 676 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 POMT1Q9Y6A1 747 aa10.19□□□□□ -0.78
XRCC3-208ENST00000554811 LOC400499M0QZD8 3231 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 LY6G6EA0A0G2JKS1 128 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 hCG_38984A0A1B0GV85 526 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 TRDCB7Z8K6 153 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 SEC11BP0C7V7 166 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 HNF1AP20823 631 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 DTYMKP23919 212 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 CLN3Q13286 438 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 IL13RA2Q14627 380 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 KCNMB1Q16558 191 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 BTNL3Q6UXE8 466 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 HINT2Q9BX68 163 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 PRO1933Q9H354 126 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 U3KQA8 63 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 GAPDHP04406 335 aaKnown RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 FKBP2P26885 142 aaKnown RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 PCP4P48539 62 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 DUSP3P51452 185 aaPredicted RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 ZNF787Q6DD87 383 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 NUDT16L1Q9BRJ7 211 aaKnown RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 MTCH1Q9NZJ7 389 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 FOXD3Q9UJU5 478 aaPredicted RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 SLC22A20A6NK97 555 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 SCAF4O95104 1147 aaKnown RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 FAM53AQ6NSI3 398 aaPredicted RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 C6orf15Q6UXA7 325 aaPredicted RBP10.18□□□□□ -0.78
XRCC3-208ENST00000554811 DMBX1Q8NFW5 382 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 OR10V1Q8NGI7 309 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 TMEM222Q9H0R3 208 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 PCED1AQ9H1Q7 454 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 PRSS50Q9UI38 385 aa10.18□□□□□ -0.78
XRCC3-208ENST00000554811 ARFGEF3Q5TH69 2177 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 CDIPTO14735 213 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 NDUFA2O43678 99 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 CRYGSP22914 178 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 SLC25A22Q9H936 323 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
XRCC3-208ENST00000554811 TUBD1Q9UJT1 453 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms