RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MED12LQ86YW9 2145 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR5A2Q8NGI9 324 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 PLEKHF2Q9H8W4 249 aa13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
ARHGEF40-203ENST00000554514 A0A0G2JRQ6 117 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 SELEP16581 610 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 HAGHQ16775 308 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 MPV17LQ2QL34 196 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 MDP1Q86V88 176 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR10J5Q8NHC4 309 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 DDA1Q9BW61 102 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 SCRT1Q9BWW7 348 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A10PA6NDY2 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A18PA6NE21 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A16PA6NEW6 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A20PA6NIJ5 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A8PA6NJQ4 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A22PA8MWA6 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A12PA8MX19 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A5PA8MXJ8 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A23PA8MXZ1 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 PGLYRP1O75594 196 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 HEXAP06865 529 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A15PP0C7V4 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A13PP0C7W8 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A14PP0C7W9 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM90A24PP0C7X0 464 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 PSG2P11465 335 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 SNRPEP62304 92 aaKnown RBP13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZNF266Q14584 549 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM180AQ6UWF9 173 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 Q8NFD4 153 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 C12orf57Q99622 126 aa13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
ARHGEF40-203ENST00000554514 hCG_1809904A0A1W2PP81 198 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 A0A1W2PR64 198 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 A0A1W2PRV1 198 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 MT-CO3P00414 261 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 CELA3BP08861 270 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 PMELP40967 661 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 ALKBH2Q6NS38 261 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 TMPRSS7Q7RTY8 843 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 IL22RA1Q8N6P7 574 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 HIST1H2BAQ96A08 127 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 LYRM2Q9NU23 88 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 COL27A1Q8IZC6 1860 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 A0A1W2PPE2 198 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 K7N7A8 449 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 DEGS1O15121 323 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 SAXO1Q8IYX7 474 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 PBDC1Q9BVG4 233 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 HSPA12AO43301 675 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 PITX3O75364 302 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 CNOT4O95628 575 aaKnown RBP13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 IL18BPO95998 194 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 SERPINE2P07093 398 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 SP1P08047 785 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 VDAC1P21796 283 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 GNG3P63215 75 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 HABP2Q14520 560 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 SLC25A24Q6NUK1 477 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 PCSK4Q6UW60 755 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZNF573Q86YE8 665 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 DLL3Q9NYJ7 618 aa13.36□□□□□ -0.27
ARHGEF40-203ENST00000554514 ZNF98A6NK75 572 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 TUSC2O75896 110 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 TNFSF15O95150 251 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 FBP1P09467 338 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 UCP1P25874 307 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 RAB5CP51148 216 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 RAB5BP61020 215 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 HOXA4Q00056 320 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 ODF3L1Q8IXM7 274 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 FAM24BQ8N5W8 94 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 SLC35B3Q9H1N7 401 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 C11orf1Q9H5F2 150 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 COX5BP10606 129 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 PMP22Q01453 160 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 GCNT2Q8N0V5 402 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 TAAR3PQ9P1P4 343 aa13.35□□□□□ -0.27
ARHGEF40-203ENST00000554514 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 IAPPP10997 89 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 RND3P61587 244 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 HMGN3Q15651 99 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 COMMD1Q8N668 190 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR2W1Q9Y3N9 320 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 C1orf196B1AJZ1 125 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms