RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 CDNFQ49AH0 187 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 LRRC10Q5BKY1 277 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 ATPAF1Q5TC12 328 aaPredicted RBP5.55□□□□□ -1.52
KTN1-213ENST00000554306 SHEQ5VZ18 495 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 STUMQ69YW2 141 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 PYHIN1Q6K0P9 492 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 Q6P435 159 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 PRSS57Q6UWY2 283 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 FAM131AQ6UXB0 335 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 ZNF788Q6ZQV5 615 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 GDPD3Q7L5L3 318 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 C6orf201Q7Z4U5 140 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 IZUMO1Q8IYV9 350 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 CD177Q8N6Q3 437 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 TMEM185AQ8NFB2 350 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 OR8B3Q8NGG8 313 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 C10orf105Q8TEF2 133 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 RAB39BQ96DA2 213 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 SDSLQ96GA7 329 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 ARHGAP5-AS1Q96IT6 56 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 SNX22Q96L94 193 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 OR8B2Q96RD0 313 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 TSC22D3Q99576 134 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 FAAP24Q9BTP7 215 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 DPCDQ9BVM2 203 aaPredicted RBP5.55□□□□□ -1.52
KTN1-213ENST00000554306 PECRQ9BY49 303 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 FAM234AQ9H0X4 552 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 NARFLQ9H6Q4 476 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 HSF4Q9ULV5 492 aa5.55□□□□□ -1.52
KTN1-213ENST00000554306 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
KTN1-213ENST00000554306 GCN1Q92616 2671 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 TRAV24A0A0B4J272 114 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 CEACAM18A8MTB9 384 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SERPINE3A8MV23 424 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 K7N7A8 449 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 F2RL2O00254 374 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 HSPB6O14558 160 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SIGLEC5O15389 551 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 TK1P04183 234 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 HIST1H1DP16402 221 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 NDUFB7P17568 137 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 PTBP1P26599 531 aaKnown RBP eCLIP5.54□□□□□ -1.52
KTN1-213ENST00000554306 CHATP28329 748 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 PRSS3P35030 304 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 NPY4RP50391 375 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 TMEM50BP56557 158 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 TAS2R20P59543 309 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 ZNF45Q02386 682 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 MADCAM1Q13477 382 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 ZNF846Q147U1 533 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 ZNF260Q3ZCT1 412 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 CD300EQ496F6 205 aaPredicted RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 PYDC2Q56P42 97 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 Q5PR19 223 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SIGIRRQ6IA17 410 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SNX29P2Q8IUI4 249 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 BPIFB2Q8N4F0 458 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SETD6Q8TBK2 473 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 FCAMRQ8WWV6 532 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 CMSS1Q9BQ75 279 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 SULT4A1Q9BR01 284 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 BPESC1Q9GZL8 116 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 CHST6Q9GZX3 395 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 PPA2Q9H2U2 334 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 RIMS4Q9H426 269 aaPredicted RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 AUNIPQ9H7T9 357 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 ZMAT3Q9HA38 289 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 PATZ1Q9HBE1 687 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 CHMP1AQ9HD42 196 aaPredicted RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 ETAA1Q9NY74 926 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 RCC2Q9P258 522 aaKnown RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 KAAG1Q9UBP8 84 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 SLC25A10Q9UBX3 287 aaPredicted RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 ZNF222Q9UK12 451 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 MAB21L2Q9Y586 359 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 DOCK11Q5JSL3 2073 aa5.54□□□□□ -1.52
KTN1-213ENST00000554306 USP9YO00507 2555 aaPredicted RBP5.54□□□□□ -1.52
KTN1-213ENST00000554306 HELZ2Q9BYK8 2649 aaKnown RBP5.53□□□□□ -1.52
KTN1-213ENST00000554306 LRBAP50851 2863 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 IGHV4-30-2A0A087WSY4 118 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 TMEM30CPA0ZSE6 113 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 TMEM235A6NFC5 223 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 PRSS29PA6NIE9 313 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 FOXI3A8MTJ6 420 aaPredicted RBP5.53□□□□□ -1.52
KTN1-213ENST00000554306 SULT1C2O00338 296 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 MFNGO00587 321 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 DVL1O14640 695 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
KTN1-213ENST00000554306 CA11O75493 328 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 RBBP9O75884 186 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 ECDO95905 644 aaPredicted RBP5.53□□□□□ -1.52
KTN1-213ENST00000554306 HLA-DQB1P01920 261 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 TFF1P04155 84 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 MELTFP08582 738 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 WNT2P09544 360 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 GATA3P23771 443 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 ETV6P41212 452 aa5.53□□□□□ -1.52
KTN1-213ENST00000554306 CBX5P45973 191 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms