RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RTN4RL2Q86UN3 420 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 OR4K15Q8NH41 348 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 CORO2AQ92828 525 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 COX4I2Q96KJ9 171 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ING3Q9NXR8 418 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ANXA10Q9UJ72 324 aa12.02□□□□□ -0.49
SHMT2-210ENST00000553950 ELF5Q9UKW6 265 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-210ENST00000553950 APCP25054 2843 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 CELSR2Q9HCU4 2923 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 ANKRD20A5PA0PJZ0 165 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 J3QRK9 145 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 FABP7O15540 132 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 LIPFP07098 398 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 AKAIN1P0CW23 69 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 OR3A3P47888 321 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 LMO4P61968 165 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 LOXL1Q08397 574 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-210ENST00000553950 RNASE10Q5GAN6 216 aaKnown RBP12.01□□□□□ -0.49
SHMT2-210ENST00000553950 BTN2A1Q7KYR7 527 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 FAM185AQ8N0U4 392 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 OR5H2Q8NGV7 314 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 FAM216AQ8WUB2 273 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF714Q96N38 554 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 SDHCQ99643 169 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-210ENST00000553950 ST6GALNAC5Q9BVH7 336 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 ABCB10Q9NRK6 738 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 KLK11Q9UBX7 282 aa12.01□□□□□ -0.49
SHMT2-210ENST00000553950 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
SHMT2-210ENST00000553950 POLR3KQ9Y2Y1 108 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-210ENST00000553950 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 NAP1L6A6NFF2 107 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 CDK10Q15131 360 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 STEAP1BQ6NZ63 245 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 TMEM17Q86X19 198 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 OR5AP2Q8NGF4 316 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 MRGPRDQ8TDS7 321 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 GALMQ96C23 342 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 Q96MF0 132 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 CABLES2Q9BTV7 478 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 TAF9BQ9HBM6 251 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 C19orf12Q9NSK7 152 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 CALYQ9NYX4 217 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 POLQO75417 2590 aa12□□□□□ -0.49
SHMT2-210ENST00000553950 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 PPIAL4CA0A0B4J2A2 164 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 RGS11O94810 467 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 CD74P04233 296 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 IFNA6P05013 189 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 IL2RGP31785 369 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 HTD2P86397 168 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-210ENST00000553950 BAK1Q16611 211 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 VAX1Q5SQQ9 334 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 ARRDC1Q8N5I2 433 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 GVQW1Q8N7I0 195 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 OR13A1Q8NGR1 328 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 CCDC107Q8WV48 283 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 SNAPC3Q92966 411 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF230Q9UIE0 474 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-210ENST00000553950 JPT1Q9UK76 154 aa11.99□□□□□ -0.49
SHMT2-210ENST00000553950 YLPM1P49750 1951 aaKnown RBP11.99□□□□□ -0.49
SHMT2-210ENST00000553950 CR1P17927 2039 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 KIAA1324LA8MWY0 1029 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-210ENST00000553950 B4DSR2 109 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 DISC1C4P0D8 188 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 C12orf77C9JDV5 145 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 NPIPB11E5RHQ5 1161 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 M0R1W7 72 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 RAB3DO95716 219 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 ZNF728P0DKX0 622 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 RCC1P18754 421 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-210ENST00000553950 GATA3P23771 443 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 HRH1P35367 487 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 ECI1P42126 302 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 SEC61A1P61619 476 aaKnown RBP11.98□□□□□ -0.49
SHMT2-210ENST00000553950 OR52W1Q6IF63 320 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 KRTAP1-3Q8IUG1 177 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 LY6G5BQ8NDX9 201 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 OR52M1Q8NGK5 317 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 ZFAND2BQ8WV99 257 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 ARL11Q969Q4 196 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 C1orf159Q96HA4 380 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 PRRT1Q99946 306 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 GINS4Q9BRT9 223 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 REG4Q9BYZ8 158 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
SHMT2-210ENST00000553950 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.493e-7■■■■■ 47.5
SHMT2-210ENST00000553950 A0A096LNT2 108 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms