RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MPPED2Q15777 294 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CCL15Q16663 113 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ARHGAP11BQ3KRB8 267 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 FBXL19-AS1Q494R0 122 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ABCA11PQ4W5N1 156 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 MESTQ5EB52 335 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 C9orf129Q5T035 196 aaKnown RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 N4BP2L1Q5TBK1 243 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 FAM222AQ5U5X8 452 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TMEM215Q68D42 235 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 GUSBP11Q6P575 273 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TMEM205Q6UW68 189 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SCGB1D4Q6XE38 83 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 IL34Q6ZMJ4 242 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 FAM19A3Q7Z5A8 133 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TMED4Q7Z7H5 227 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CALHM3Q86XJ0 350 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ZBTB8OSQ8IWT0 167 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TMEM256Q8N2U0 113 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 NATD1Q8N6N6 113 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SLC35G3Q8N808 338 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PXT1Q8NFP0 134 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 GPR32P1Q8NGA4 272 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 OR10G2Q8NGC3 310 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 OR10X1Q8NGY0 326 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SPPL2BQ8TCT7 592 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 Q8WTZ3 238 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 C15orf40Q8WUR7 153 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TNFAIP8L1Q8WVP5 186 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PDXPQ96GD0 296 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SMARCD1Q96GM5 515 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 DIRAS2Q96HU8 199 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 BTF3L4Q96K17 158 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SLC35E1Q96K37 410 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 CEP170P1Q96L14 293 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 YPEL4Q96NS1 127 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 DERL3Q96Q80 235 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 HOPXQ9BPY8 73 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 CMSS1Q9BQ75 279 aaKnown RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 PRSS27Q9BQR3 290 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 RTBDNQ9BSG5 229 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 CHAC1Q9BUX1 264 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 KIFC1Q9BW19 673 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 EBPLQ9BY08 206 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SAMD10Q9BYL1 202 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 TRABDQ9H4I3 376 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ZSCAN16Q9H4T2 348 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 FAM96AQ9H5X1 160 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 C12orf10Q9HB07 376 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ENY2Q9NPA8 101 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 C8orf4Q9NR00 106 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 MMP26Q9NRE1 261 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 DDX19AQ9NUU7 478 aaKnown RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 TAS2R5Q9NYW4 299 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PKIGQ9Y2B9 76 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 PRELID3BQ9Y3B1 194 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ZNF337Q9Y3M9 751 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 SLC22A7Q9Y694 548 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 WSB1Q9Y6I7 421 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 MN1Q10571 1320 aaPredicted RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 FLT4P35916 1363 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 ANKRD30AQ9BXX3 1397 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 RIMS2Q9UQ26 1411 aa1.54□□□□□ -2.16
SRP54-204ENST00000553923 NUP153P49790 1475 aaKnown RBP1.54□□□□□ -2.16
SRP54-204ENST00000553923 TEX50A0A1B0GTY4 177 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 A0A1W2PP64 1363 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 C5orf49A4QMS7 147 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 DISC1C4P0D8 188 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 C9JQL5 133 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 K7EPK0 472 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 COPEO14579 308 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 MRASO14807 208 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 GYG2O15488 501 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CHP2O43745 196 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 SLC37A4O43826 429 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 IGLV2-8P01709 118 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 IGHV3-11P01762 117 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 MAS1P04201 325 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ATP5G1P05496 136 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OR13C7P0DN81 318 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 PSG2P11465 335 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CD79AP11912 226 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ADRB3P13945 408 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZNF708P17019 499 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 OMGP23515 440 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 MIPP30301 263 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ZNF83P51522 516 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CRISP3P54108 245 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 CMC4P56277 68 aaPredicted RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 DEFA1P59665 94 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 BTN3A2P78410 334 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 ADAMTSL3P82987 1691 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 DAZ2Q13117 558 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 EDDM3AQ14507 147 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 BATFQ16520 125 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 LIN52Q52LA3 116 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 TRMT12Q53H54 448 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 YIF1BQ5BJH7 314 aa1.53□□□□□ -2.16
SRP54-204ENST00000553923 HENMT1Q5T8I9 393 aaKnown RBP1.53□□□□□ -2.16
SRP54-204ENST00000553923 HES3Q5TGS1 186 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms