RNA–Protein interactions for RNA: ENST00000553621.1

AC004817.1-201, humanhuman

TSL 4 BASIC

Gene AC004817.1, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.1-201ENST00000553621 IGHV1-3A0A0C4DH29 117 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 LOC100130705A0A1B0GUX0 176 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 A0A1W2PPK0 400 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 TMEM30CPA0ZSE6 113 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 CCRL2O00421 344 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 FADS2O95864 444 aaKnown RBP6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 RPLP1P05386 114 aaKnown RBP6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 LIMS3P0CW19 117 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 LIMS4P0CW20 117 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 ETV1P50549 477 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 RAB7AP51149 207 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 LUMP51884 338 aaPredicted RBP6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 EGFEM1PQ0D2K5 195 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 ELP2Q6IA86 826 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 ZNF529Q6P280 563 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 C5orf24Q7Z6I8 188 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 THNSL2Q86YJ6 484 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 STPG2Q8N412 459 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 PRR18Q8N4B5 295 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 OR51D1Q8NGF3 324 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 RHOXF1Q8NHV9 184 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 ARL11Q969Q4 196 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 TMEM106AQ96A25 262 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 EAF1Q96JC9 268 aaPredicted RBP6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 METTL9Q9H1A3 318 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 RHOFQ9HBH0 211 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 PCDHB16Q9NRJ7 776 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 FAM118AQ9NWS6 357 aa6.12□□□□□ -1.43
AC004817.1-201ENST00000553621 PNMA8CA0A1B0GUJ8 204 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 C15orf65H3BRN8 121 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 AIPO00170 330 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 FGF16O43320 207 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 DUS4LO95620 317 aaKnown RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 LALBAP00709 142 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 IGHG2P01859 326 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 CSTBP04080 98 aaKnown RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 MYF6P23409 242 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 ZNF93P35789 620 aaPredicted RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 MYCNOSP40205 109 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 VHLP40337 213 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 GPR12P47775 334 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 RBM11P57052 281 aaKnown RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 PPP3R1P63098 170 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 SLC35B1P78383 322 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 ZNF816Q0VGE8 651 aaPredicted RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 RAB40BQ12829 278 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 SLC22A6Q4U2R8 563 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 ZNF695Q8IW36 515 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 FOXRED2Q8IWF2 684 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 OR8H3Q8N146 312 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 OR4K15Q8NH41 348 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 OR52N1Q8NH53 320 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 HAVCR2Q8TDQ0 301 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 GPR148Q8TDV2 347 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 CHPT1Q8WUD6 406 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 MUL1Q969V5 352 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 CPNE2Q96FN4 548 aaPredicted RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 RAX2Q96IS3 184 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 Q96MT0 163 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 PRR25Q96S07 402 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 HSPB9Q9BQS6 159 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 C9orf16Q9BUW7 83 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 CLEC2DQ9UHP7 191 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 RPL36Q9Y3U8 105 aaKnown RBP6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 PLXNB1O43157 2135 aa6.11□□□□□ -1.43
AC004817.1-201ENST00000553621 TRAV8-7A0A075B6U6 113 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 C12orf77C9JDV5 145 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 H0YHG0 523 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 MPZL2O60487 215 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 WBP4O75554 376 aaKnown RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 BAG2O95816 211 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 GAPDHP04406 335 aaKnown RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 CD2P06729 351 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 SLC2A2P11168 524 aaPredicted RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 BDKRB2P30411 391 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 KCNJ3P48549 501 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 MRPL28Q13084 256 aaKnown RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 RIPK1Q13546 671 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 GNMTQ14749 295 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 ZFP1Q6P2D0 407 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 RPL22L1Q6P5R6 122 aaKnown RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 ASCL4Q6XD76 172 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 Q8N6K4 173 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 Q8N9W7 124 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 OR1L1Q8NH94 360 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 RTN4IP1Q8WWV3 396 aaPredicted RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 MYCBPQ99417 103 aaPredicted RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 P2RX4Q99571 388 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 S100A13Q99584 98 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 ZNF184Q99676 751 aaPredicted RBP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 ASCL2Q99929 193 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 BANF2Q9H503 90 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 DCLRE1BQ9H816 532 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 LINC00574Q9H8X3 128 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 S100A14Q9HCY8 104 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 TMEM138Q9NPI0 162 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 GFOD1Q9NXC2 390 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 TRAPPC2LQ9UL33 140 aa6.1□□□□□ -1.43
AC004817.1-201ENST00000553621 NOTCH3Q9UM47 2321 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms