RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 MPTX1A8MV57 137 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IFNL4K9M1U5 179 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 GPR31O00270 319 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SLC33A1O00400 549 aaPredicted RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 TAAR5O14804 337 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SHOXO15266 292 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 MLNRO43193 412 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNHIT1O43257 154 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 RLN2P04090 185 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 HEXAP06865 529 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 HOXB5P09067 269 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SCTP09683 121 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 MPV17P39210 176 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 P2RX3P56373 397 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ERVS71-1P61550 626 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 HERV-K104P61576 105 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 RAB32Q13637 225 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 HERPUD1Q15011 391 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 OR8G1Q15617 311 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ALKBH6Q3KRA9 238 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ABCA11PQ4W5N1 156 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IGSF11Q5DX21 431 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SPATA46Q5T0L3 261 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 GGNBP1Q5YKI7 109 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF474Q6S9Z5 364 aaPredicted RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF497Q6ZNH5 498 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SSX8Q7RTT4 187 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 H1FOOQ8IZA3 346 aaPredicted RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 LGI3Q8N145 548 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 CLEC18CQ8NCF0 446 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 BHLHE23Q8NDY6 225 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 OR10Z1Q8NGY1 313 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 DYRK2Q92630 601 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IL22RA2Q969J5 263 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ABHD14BQ96IU4 210 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ARPC5LQ9BPX5 153 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ADAT1Q9BUB4 502 aaKnown RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 SHARPINQ9H0F6 387 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 OPN3Q9H1Y3 402 aaPredicted RBP5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 PIGMQ9H3S5 423 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 PLEKHA2Q9HB19 425 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 CYTL1Q9NRR1 136 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 RDH8Q9NYR8 311 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 GLS2Q9UI32 602 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF835Q9Y2P0 537 aa5.08□□□□□ -1.6
VIPAS39-204ENST00000553576 FRYQ5TBA9 3013 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 A0A1B0GW55 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 hCG_1807616A0A1W2PRN6 198 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 MFSD2BA6NFX1 497 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 A8MXE2 369 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 H0YL77 283 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 K7EM74 188 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 K7ENP7 123 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 CDIPTO14735 213 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HS3ST1O14792 307 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 FGF16O43320 207 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DEDDO75618 318 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 AGFG2O95081 481 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 CDS2O95674 445 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 OR2H2O95918 312 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 IGHV3-13P01766 116 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 OR5AC1P0C628 307 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L2P0CJ85 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L3P0CJ86 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L4P0CJ87 422 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L5P0CJ88 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L6P0CJ89 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4L7P0CJ90 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HKR1P10072 659 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 SLC25A6P12236 298 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 UCP1P25874 307 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUSP1P28562 367 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 GCH1P30793 250 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 GLRXP35754 106 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 NUP62P37198 522 aaPredicted RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 CD200P41217 278 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 TDGF1P3P51864 188 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 NKX6-1P78426 367 aaPredicted RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HLA-DRB3P79483 266 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HMGN3Q15651 99 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 TSC22D1Q15714 1073 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 MSMO1Q15800 293 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 AANATQ16613 207 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 IAH1Q2TAA2 248 aaPredicted RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 LRRC37A5PQ49AS3 106 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 PAN3Q58A45 887 aaKnown RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 SLC35E4Q6ICL7 350 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 FIP1L1Q6UN15 594 aaKnown RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 ACP7Q6ZNF0 438 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 Q6ZR03 302 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HSD17B13Q7Z5P4 300 aaPredicted RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM90A1Q86YD7 464 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 PDZD9Q8IXQ8 264 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM71E2Q8N5Q1 922 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 NAXEQ8NCW5 288 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 BVESQ8NE79 360 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 OR1S1Q8NH92 325 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DCUN1D4Q92564 292 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms