RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 PIGYQ3MUY2 71 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 DDI2Q5TDH0 399 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 PRAMEF5Q5TYX0 476 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 UNQ9370/PRO34162Q6UXP9 181 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 ABHD12Q8N2K0 398 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 NKAIN3Q8N8D7 197 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 ZFP41Q8N8Y5 198 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 NR1H4Q96RI1 486 aaPredicted RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 YTHDF1Q9BYJ9 559 aaKnown RBP9.42□□□□□ -0.9
SRP54-203ENST00000553544 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 LINC00574Q9H8X3 128 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 ISYNA1Q9NPH2 558 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 HILPDAQ9Y5L2 63 aa9.42□□□□□ -0.9
SRP54-203ENST00000553544 TRAV8-7A0A075B6U6 113 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 MAGEA13PA6NCF6 341 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ZNF780AO75290 641 aaPredicted RBP9.41□□□□□ -0.9
SRP54-203ENST00000553544 HTR3BO95264 441 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 KCNJ3P48549 501 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 TBCEQ15813 527 aaPredicted RBP9.41□□□□□ -0.9
SRP54-203ENST00000553544 PAN3Q58A45 887 aaKnown RBP9.41□□□□□ -0.9
SRP54-203ENST00000553544 UTF1Q5T230 341 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 RSBN1Q5VWQ0 802 aaPredicted RBP9.41□□□□□ -0.9
SRP54-203ENST00000553544 LYPD6Q86Y78 171 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 OSR2Q8N2R0 312 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 PLPPR1Q8TBJ4 325 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 KIRREL1Q96J84 757 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 OR14A2Q96R54 314 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 MCRIP2Q9BUT9 160 aaKnown RBP9.41□□□□□ -0.9
SRP54-203ENST00000553544 BARHL1Q9BZE3 327 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 FAM192AQ9GZU8 254 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 METTL9Q9H1A3 318 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ZNF286AQ9HBT8 521 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ZNF581Q9P0T4 197 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 DPM3Q9P2X0 92 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ING4Q9UNL4 249 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 ST3GAL6Q9Y274 331 aa9.41□□□□□ -0.9
SRP54-203ENST00000553544 TENM2Q9NT68 2774 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 NPIPB11E5RHQ5 1161 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 LY6LH3BQJ8 138 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 HSPB6O14558 160 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 RBM11P57052 281 aaKnown RBP9.4□□□□□ -0.9
SRP54-203ENST00000553544 MLLT11Q13015 90 aaPredicted RBP9.4□□□□□ -0.9
SRP54-203ENST00000553544 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 ZNF367Q7RTV3 350 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 CDH26Q8IXH8 852 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 OR4D6Q8NGJ1 314 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 OR13A1Q8NGR1 328 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 NDNFQ8TB73 568 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 CAPSLQ8WWF8 208 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 PHYHIPQ92561 330 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 FCGR1BQ92637 280 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 AKR1E2Q96JD6 320 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 ING3Q9NXR8 418 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 CALYQ9NYX4 217 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 KIF25Q9UIL4 384 aa9.4□□□□□ -0.9
SRP54-203ENST00000553544 MEIKINA0A087WXM9 373 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 PNMA8CA0A1B0GUJ8 204 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 A0A1W2PP11 408 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 A0A1W2PPK0 400 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 FAM172BPA6NC97 362 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 LEUTXA8MZ59 168 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 GEMIN2O14893 280 aaKnown RBP9.39□□□□□ -0.91
SRP54-203ENST00000553544 IL1AP01583 271 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 CSTBP04080 98 aaKnown RBP9.39□□□□□ -0.91
SRP54-203ENST00000553544 DGCR2P98153 550 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 GPR176Q14439 515 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 IRF3Q14653 427 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 MPV17LQ2QL34 196 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 KHDC1LQ5JSQ8 128 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 MRPL41Q8IXM3 137 aaKnown RBP9.39□□□□□ -0.91
SRP54-203ENST00000553544 SUMF2Q8NBJ7 301 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 OR51D1Q8NGF3 324 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 DERL3Q96Q80 235 aa9.39□□□□□ -0.91
SRP54-203ENST00000553544 DPCDQ9BVM2 203 aaPredicted RBP9.39□□□□□ -0.91
SRP54-203ENST00000553544 ARL6IP5O75915 188 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
SRP54-203ENST00000553544 HSMCR30P0CW71 290 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 GTF2F2P13984 249 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 SERPINA2P20848 420 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 GLP1RP43220 463 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 PRRX1P54821 245 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 SLC22A6Q4U2R8 563 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 TPTE2P1Q5T6R2 138 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 C16orf82Q7Z2V1 217 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 OR10A7Q8NGE5 316 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 OR9G1Q8NH87 305 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 CREB3L1Q96BA8 519 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 MRPS24Q96EL2 167 aaKnown RBP9.38□□□□□ -0.91
SRP54-203ENST00000553544 VCX3AQ9NNX9 186 aa9.38□□□□□ -0.91
SRP54-203ENST00000553544 IDI2-AS1Q9NZ38 188 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms