RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 LDLRAD3Q86YD5 345 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 ZBTB34Q8NCN2 500 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 OR5T2Q8NGG2 359 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 SCARB1Q8WTV0 552 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 RND1Q92730 232 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 TOMM40LQ969M1 308 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 SNRNP40Q96DI7 357 aaKnown RBP6.17□□□□□ -1.42
ATXN3-221ENST00000553498 ABHD14BQ96IU4 210 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 SPIN2AQ99865 258 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 SPIN2BQ9BPZ2 258 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 C1QTNF6Q9BXI9 259 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 TOLLIPQ9H0E2 274 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 ARL6Q9H0F7 186 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 KCNIP1Q9NZI2 227 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 Q9UFV3 132 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 KIF25Q9UIL4 384 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 OR2W1Q9Y3N9 320 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 PCNX2A6NKB5 2137 aa6.17□□□□□ -1.42
ATXN3-221ENST00000553498 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 C3orf85A0A1B0GTC6 90 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 LINC00862A6NCI5 91 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 OOEPA6NGQ2 149 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 A6NLC8 198 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 RNF212BA8MTL3 300 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-221ENST00000553498 HS3ST1O14792 307 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TAAR5O14804 337 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 MPPED1O15442 326 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ZNHIT1O43257 154 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 PAX4O43316 350 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 BCL2L11O43521 198 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 CDS2O95674 445 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 PI3P19957 117 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 CD40P25942 277 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 HTR2BP41595 481 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM187Q14656 261 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 HMGN3Q15651 99 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ANKRD55Q3KP44 614 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ALKBH6Q3KRA9 238 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 FBXL19-AS1Q494R0 122 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 FAM209AQ5JX71 171 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ACP7Q6ZNF0 438 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 Q6ZPA2 131 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 Q6ZR03 302 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 C11orf53Q8IXP5 236 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 H1FOOQ8IZA3 346 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-221ENST00000553498 BVESQ8NE79 360 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 LRRC20Q8TCA0 184 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM171Q8WVE6 324 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 DYRK2Q92630 601 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 RDH5Q92781 318 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 LRRC46Q96FV0 321 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 SEC22AQ96IW7 307 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 LURAP1Q96LR2 239 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ZNF488Q96MN9 340 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM56Q96MV1 263 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 AQP10Q96PS8 301 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 DMRTA2Q96SC8 542 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM222Q9H0R3 208 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 PLEKHA2Q9HB19 425 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 MED9Q9NWA0 146 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TRAPPC2LQ9UL33 140 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM56-RWDD3S4R434 201 aa6.16□□□□□ -1.42
ATXN3-221ENST00000553498 NCKAP5O14513 1909 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 CLEC18AA5D8T8 446 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 RNF222A6NCQ9 220 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SRRM5B3KS81 715 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 H0Y980 276 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 H0YL77 283 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 H3BS24 57 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 CCSO14618 274 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 BET1O15155 118 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 CD55P08174 381 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SCTP09683 121 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SLC25A6P12236 298 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 GZMHP20718 246 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 UCP1P25874 307 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 DUSP1P28562 367 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 SSTR2P30874 369 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 GNRHRP30968 328 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 LUMP51884 338 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 FXYD4P59646 89 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 FAM27E3Q08E93 113 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 EXOSC2Q13868 293 aaKnown RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 PDCD1Q15116 288 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 IAH1Q2TAA2 248 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 IGSF11Q5DX21 431 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 EIF5AL1Q6IS14 154 aaKnown RBP6.15□□□□□ -1.42
ATXN3-221ENST00000553498 RPRMLQ8N4K4 120 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 TCTEX1D1Q8N7M0 179 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 CLEC18CQ8NCF0 446 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 ST6GALNAC3Q8NDV1 305 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 OR2Z1Q8NG97 314 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 OR5D13Q8NGL4 314 aa6.15□□□□□ -1.42
ATXN3-221ENST00000553498 STOML3Q8TAV4 291 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms