RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SRSF10O75494 262 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 GATBO75879 557 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 CCDC159P0C7I6 412 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 LIMS3P0CW19 117 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 LIMS4P0CW20 117 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ATF1P18846 271 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 PRKACBP22694 351 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 VHLP40337 213 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 CEBPDP49716 269 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 RBP2P50120 134 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ARF6P62330 175 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 RELQ04864 619 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF154Q13106 437 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 UBE2V2Q15819 145 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF181Q2M3W8 571 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF404Q494X3 552 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM155Q4W5P6 130 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 LRRC10Q5BKY1 277 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ARMCX4Q5H9R4 360 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 RPL22L1Q6P5R6 122 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 RBMS3Q6XE24 437 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 RBPMS2Q6ZRY4 209 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 SLC25A26Q70HW3 274 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 BTN2A1Q7KYR7 527 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 SLC36A1Q7Z2H8 476 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 SERPINA12Q8IW75 414 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 MKXQ8IYA7 352 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 FGFRL1Q8N441 504 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 BPIFB2Q8N4F0 458 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM185AQ8NFB2 350 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 TSPAN14Q8NG11 270 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR4M1Q8NGD0 313 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR51A4Q8NGJ6 313 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR5D18Q8NGL1 313 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR13C9Q8NGT0 318 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR10AC1Q8NH08 325 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 NANPQ8TBE9 248 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 ADAT3Q96EY9 351 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 S100A13Q99584 98 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 OR51I2Q9H344 312 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 SLA2Q9H6Q3 261 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 INPP5EQ9NRR6 644 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 TNFRSF19Q9NS68 423 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 GLS2Q9UI32 602 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 PSORS1C1Q9UIG5 152 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 DIMT1Q9UNQ2 313 aaKnown RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 CAB39Q9Y376 341 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-220ENST00000553491 HSPE1-MOB4S4R3N1 261 aa3.85□□□□□ -1.79
ATXN3-220ENST00000553491 A0A0B4J293 547 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4CA0A0B4J2A2 164 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 A0A1B0GW55 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PQLC2LA1A4F0 135 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 RFPL4AA6NLU0 287 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM212A6NML5 194 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 OR4C45A6NMZ5 311 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 E9PQ18 207 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 RFPL4AL1F8VTS6 287 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 SLC1A7O00341 560 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 ANGPTL7O43827 346 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 LHBP01229 141 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 MAS1P04201 325 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 CDK1P06493 297 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 CD2P06729 351 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 FAM157CP0CG43 387 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L2P0CJ85 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L3P0CJ86 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L4P0CJ87 422 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L5P0CJ88 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L6P0CJ89 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L7P0CJ90 424 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4GP0DN37 164 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PSG2P11465 335 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PIPP12273 146 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 MUC1P15941 1255 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PRKACAP17612 351 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 CELP19835 753 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 RAB3AP20336 220 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 BCL3P20749 454 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 AZGP1P25311 298 aaKnown RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PRDX2P32119 198 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 HSPA13P48723 471 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 FGF12P61328 243 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PPP3R1P63098 170 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 PRB3Q04118 309 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 MRPL28Q13084 256 aaKnown RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 RSU1Q15404 277 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 SMIM21Q3B7S5 101 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 METTL11BQ5VVY1 283 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 WDR25Q64LD2 544 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 DUX4L9Q6RFH8 374 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 FIP1L1Q6UN15 594 aaKnown RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 ACP7Q6ZNF0 438 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 CALHM1Q8IU99 346 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 SYS1Q8N2H4 156 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 FAM216BQ8N7L0 139 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 ASCC1Q8N9N2 400 aaKnown RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 ZSCAN4Q8NAM6 433 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-220ENST00000553491 ZNRF1Q8ND25 227 aa3.84□□□□□ -1.79
ATXN3-220ENST00000553491 CCDC54Q8NEL0 328 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms