RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CENPVL3A0A0U1RRI6 287 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 KBTBD11-OT1A0A1B0GTJ5 212 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 SERPINE3A8MV23 424 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 C12orf77C9JDV5 145 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 XRCC3O43542 346 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 SSX5O60225 188 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 SCGNO76038 276 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 TOX4O94842 621 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 GSTP1P09211 210 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 IGHV1-8P0DP01 117 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 SSTR5P35346 364 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 GLP1RP43220 463 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 CDNFQ49AH0 187 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 OR4K15Q8NH41 348 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 CCDC107Q8WV48 283 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 AUNIPQ9H7T9 357 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 METTL8Q9H825 291 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 SIRT7Q9NRC8 400 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 CALYQ9NYX4 217 aa12.13□□□□□ -0.47
MTHFD1-204ENST00000553405 TMEM235A6NFC5 223 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 POM121CA8CG34 1229 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 F2RL2O00254 374 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 ORC5O43913 435 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 CLPXO76031 633 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 HLA-DQB1P01920 261 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 SOX6P35712 828 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 KLRD1Q13241 179 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 HMGN3Q15651 99 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 PRAMEF5Q5TYX0 476 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 HACD4Q5VWC8 232 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 ZNF554Q86TJ5 538 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 LAX1Q8IWV1 398 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 KIRREL1Q96J84 757 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 PCGF1Q9BSM1 259 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
MTHFD1-204ENST00000553405 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 A0A087X0M5 115 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 A0A1B0GX30 115 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 A0A1W2PPH5 198 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 PTHLHP12272 177 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 GZMHP20718 246 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 OMGP23515 440 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 CD34P28906 385 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 MNDAP41218 407 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 LOXL3P58215 753 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 FAM53AQ6NSI3 398 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 MZT2AQ6P582 158 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 TRAPPC6BQ86SZ2 158 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 IZUMO1Q8IYV9 350 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 ZNF565Q8N9K5 539 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 S100A16Q96FQ6 103 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 GAL3ST2Q9H3Q3 398 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 RIMS4Q9H426 269 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 Q9N2K0 584 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 SESN1Q9Y6P5 492 aa12.11□□□□□ -0.47
MTHFD1-204ENST00000553405 IGKV1D-8A0A087WSZ0 117 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 CRLF1O75462 422 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 FCGR3AP08637 254 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 TAS2R20P59543 309 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 LDLRAD2Q5SZI1 272 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 ZNF782Q6ZMW2 699 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 Q6ZS49 121 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 MOB1BQ7L9L4 216 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 RFESDQ8TAC1 157 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 UBALD1Q8TB05 177 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 NUDCD2Q8WVJ2 157 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 LHX4Q969G2 390 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 SOSTQ9BQB4 213 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 TAF9BQ9HBM6 251 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 DIABLOQ9NR28 239 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 TRAPPC2LQ9UL33 140 aa12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-204ENST00000553405 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 IGHV1-69DA0A0B4J2H0 117 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 HBZP02008 142 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 UBE2E1P51965 193 aa12.09□□□□□ -0.47
MTHFD1-204ENST00000553405 SRSF7Q16629 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms