RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 JOSD1Q15040 202 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SIX1Q15475 284 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM241Q24JQ0 296 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PGGHGQ32M88 737 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 GLYR1Q49A26 553 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ACSF3Q4G176 576 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 OCIAD2Q56VL3 154 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 FAM182AQ5T1J6 154 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM236Q5W0B7 351 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 MFSD12Q6NUT3 480 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PAQR6Q6TCH4 344 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM107Q6UX40 140 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF550Q7Z398 422 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CPEB2Q7Z5Q1 589 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 RPS19BP1Q86WX3 136 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 BOD1L2Q8IYS8 172 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 SLC22A15Q8IZD6 547 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 BATF2Q8N1L9 274 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 C2orf73Q8N5S3 287 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM156Q8N614 296 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM251Q8N6I4 163 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ATP6V1C2Q8NEY4 427 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 OR1K1Q8NGR3 316 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 OR51F2Q8NH61 342 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 APH1BQ8WW43 257 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 BCL2L2Q92843 193 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 RBMXL1Q96E39 390 aaKnown RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CXorf58Q96LI9 332 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 OR52E6Q96RD3 313 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 NKX3-1Q99801 234 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 CHRDL1Q9BU40 450 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TTTY12Q9BZ98 90 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ACTR3CQ9C0K3 210 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-218ENST00000553309 C20orf85Q9H1P6 137 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 MED28Q9H204 178 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ABCG5Q9H222 651 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 PRO1933Q9H354 126 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ZDHHC11Q9H8X9 412 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 ARHGAP21Q5T5U3 1957 aa3.93□□□□□ -1.78
ATXN3-218ENST00000553309 TRAV39A0A0B4J263 110 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FAM240BA0A1B0GVZ2 78 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM269A0A1B0GVZ9 245 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 A0A1W2PP18 115 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TCRBV3S1A0A5B6 114 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 LRIT2A6NDA9 550 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 GLOD5A6NK44 160 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 EFCAB9A8MZ26 197 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RNASEK-C17orf49H0YIS7 233 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TRAPPC2LH3BP13 241 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 DLGAP1O14490 977 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 EI24O14681 340 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 PIN1P1O15428 100 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SNNO75324 88 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RAD51DO75771 328 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MT-CO2P00403 227 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 GCGP01275 180 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 IGHG3P01860 377 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 THY1P04216 161 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 UCHL1P09936 223 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 IRF2P14316 349 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CD22P20273 847 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CRYGSP22914 178 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 GATA2P23769 480 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MPZP25189 248 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 BRS3P32247 399 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SSTR5P35346 364 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RBM34P42696 430 aaKnown RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TTPAP49638 278 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RGS4P49798 205 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 PPT1P50897 306 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 AQP5P55064 265 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MS4A2Q01362 244 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MXD1Q05195 221 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 VAMP3Q15836 100 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 PCK2Q16822 640 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ALKBH6Q3KRA9 238 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CYBRD1Q53TN4 286 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 VAX1Q5SQQ9 334 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 GLYATQ6IB77 296 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 OR52W1Q6IF63 320 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FAM166AQ6J272 317 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 STEAP1BQ6NZ63 245 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF343Q6P1L6 599 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SMARCD3Q6STE5 483 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 DNM1P46Q6ZS02 220 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 NUFIP2Q7Z417 695 aaKnown RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ANKRD37Q7Z713 158 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF546Q86UE3 836 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SERPINA9Q86WD7 417 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FUNDC1Q8IVP5 155 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 H1FOOQ8IZA3 346 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 Q8N402 240 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 C11orf42Q8N5U0 333 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 AMER3Q8N944 861 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CCNYQ8ND76 341 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 NUP37Q8NFH4 326 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 OR5AR1Q8NGP9 310 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms