RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 JKAMPQ9P055 326 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 TAAR3PQ9P1P4 343 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 DNAJB11Q9UBS4 358 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 SH3BGRL2Q9UJC5 107 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 METRNQ9UJH8 293 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 FBXO9Q9UK97 447 aaPredicted RBP9.69□□□□□ -0.86
RAB5C-208ENST00000551338 OR2W1Q9Y3N9 320 aa9.69□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF292O60281 2723 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 hCG_1807616A0A1W2PRN6 198 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM30CPA0ZSE6 113 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 SRRM5B3KS81 715 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 FAM87AP0C7U9 286 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 PET100P0DJ07 73 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 UCP1P25874 307 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 OR3A1P47881 315 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 KLF3P57682 345 aaPredicted RBP9.68□□□□□ -0.86
RAB5C-208ENST00000551338 ESCO2Q56NI9 601 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 SLC35E4Q6ICL7 350 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 VHLLQ6RSH7 139 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 MEX3BQ6ZN04 569 aaKnown RBP9.68□□□□□ -0.86
RAB5C-208ENST00000551338 SLC35G3Q8N808 338 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 OR2Z1Q8NG97 314 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 OR10Z1Q8NGY1 313 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 OR10J5Q8NHC4 309 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 UBALD1Q8TB05 177 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 COQ2Q96H96 371 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 MEGF10Q96KG7 1140 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM222Q9H0R3 208 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 ELOVL5Q9NYP7 299 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 GLS2Q9UI32 602 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 TRAPPC2LQ9UL33 140 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 SPEF1Q9Y4P9 236 aa9.68□□□□□ -0.86
RAB5C-208ENST00000551338 H0Y980 276 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 K7EPK0 472 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 DEDDO75618 318 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 WNT2P09544 360 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 HKR1P10072 659 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 RRASP10301 218 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 CD40P25942 277 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 UCNP55089 124 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 RPS23P62266 143 aaKnown RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 SRPXP78539 464 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 COL10A1Q03692 680 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TESK1Q15569 626 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 SMIM21Q3B7S5 101 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM268Q5VZI3 342 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 FOXRED2Q8IWF2 684 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 SELENOHQ8IZQ5 122 aaKnown RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 FAM71E2Q8N5Q1 922 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 CD177Q8N6Q3 437 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 OR10V1Q8NGI7 309 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 OR4D5Q8NGN0 318 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 STOML3Q8TAV4 291 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM56Q96MV1 263 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 MRPL37Q9BZE1 423 aaKnown RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 DUSP13Q9UII6 198 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TMED3Q9Y3Q3 217 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
RAB5C-208ENST00000551338 TMEM56-RWDD3S4R434 201 aa9.67□□□□□ -0.86
RAB5C-208ENST00000551338 APC2O95996 2303 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 F5H0A9 414 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 IFNL4K9M1U5 179 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 SCGB1D2O95969 90 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 THBDP07204 575 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 NUP62P37198 522 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 AANATQ16613 207 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 TOR2AQ5JU69 321 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 FAM74A1Q5RGS3 127 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 GCSAMQ8N6F7 178 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 BVESQ8NE79 360 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 OR52M1Q8NGK5 317 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 OR1L1Q8NH94 360 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 ITLN1Q8WWA0 313 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 IL1F10Q8WWZ1 152 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 OR2V2Q96R30 315 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 C11orf1Q9H5F2 150 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 SEBOXQ9HB31 216 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 ERRFI1Q9UJM3 462 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 ZDHHC8Q9ULC8 765 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 UBE2J1Q9Y385 318 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-208ENST00000551338 CADP27708 2225 aa9.66□□□□□ -0.86
RAB5C-208ENST00000551338 DUXBA0A1W2PPF3 345 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 NKX2-6A6NCS4 301 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 C12orf77C9JDV5 145 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 C16orf97H3BN30 126 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 TNFSF12O43508 249 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 ZNF737O75373 536 aa9.65□□□□□ -0.86
RAB5C-208ENST00000551338 PGLYRP1O75594 196 aaPredicted RBP9.65□□□□□ -0.86
RAB5C-208ENST00000551338 CDS2O95674 445 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms