RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 OPN1MWP04001 364 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 OPN1MW2P0DN77 364 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 OPN1MW3P0DN78 364 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 VHLP40337 213 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 GNG10P50151 68 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 LOXL3P58215 753 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 MED21Q13503 144 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 RBM39Q14498 530 aaKnown RBP10.37□□□□□ -0.75
NPAS3-209ENST00000551008 C6orf141Q5SZD1 244 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 RNLSQ5VYX0 342 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 C16orf82Q7Z2V1 217 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 C5orf24Q7Z6I8 188 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 LINC00596Q86U02 117 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 STX19Q8N4C7 294 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 ZNF565Q8N9K5 539 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 RBMXL1Q96E39 390 aaKnown RBP10.37□□□□□ -0.75
NPAS3-209ENST00000551008 Q96M66 194 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 BANF2Q9H503 90 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 DCLRE1BQ9H816 532 aa10.37□□□□□ -0.75
NPAS3-209ENST00000551008 TMEM30CPA0ZSE6 113 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 OOSP1A8MZH6 123 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 TOR1AO14656 332 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 SLC31A2O15432 143 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 SC5DO75845 299 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 CSTBP04080 98 aaKnown RBP10.36□□□□□ -0.75
NPAS3-209ENST00000551008 MAS1P04201 325 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 GTF2F2P13984 249 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 CEACAM3P40198 252 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 VDAC2P45880 294 aaPredicted RBP10.36□□□□□ -0.75
NPAS3-209ENST00000551008 PRRX1P54821 245 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 SLC35A2P78381 396 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 CD83Q01151 205 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 ABCA11PQ4W5N1 156 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 LRRTM1Q86UE6 522 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 CDH26Q8IXH8 852 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 JAGN1Q8N5M9 183 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 ZNF439Q8NDP4 499 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 CCDC107Q8WV48 283 aa10.36□□□□□ -0.75
NPAS3-209ENST00000551008 C12orf77C9JDV5 145 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 ZNF780AO75290 641 aaPredicted RBP10.35□□□□□ -0.75
NPAS3-209ENST00000551008 LPLP06858 475 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 SNRNP70P08621 437 aaKnown RBP10.35□□□□□ -0.75
NPAS3-209ENST00000551008 CD37P11049 281 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 MGMTP16455 207 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 BRS3P32247 399 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 ATAD3CQ5T2N8 411 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 KPRPQ5T749 579 aaPredicted RBP10.35□□□□□ -0.75
NPAS3-209ENST00000551008 AWAT2Q6E213 333 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 Q6ZPA2 131 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 NDUFA11Q86Y39 141 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 TOMM40LQ969M1 308 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 ST6GALNAC6Q969X2 333 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 RPEQ96AT9 228 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 CREB3L1Q96BA8 519 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 KCNK15Q9H427 330 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 GFOD1Q9NXC2 390 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 CKLFQ9UBR5 152 aa10.35□□□□□ -0.75
NPAS3-209ENST00000551008 IGHV3-43A0A0B4J1X8 118 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 PTGES3LE9PB15 166 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 IGHV3-43DP0DP04 118 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 RCC1P18754 421 aaPredicted RBP10.34□□□□□ -0.75
NPAS3-209ENST00000551008 ZNF816Q0VGE8 651 aaPredicted RBP10.34□□□□□ -0.75
NPAS3-209ENST00000551008 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 ACSM3Q53FZ2 586 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 RAB12Q6IQ22 244 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 SLC16A12Q6ZSM3 486 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 THNSL2Q86YJ6 484 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 DTX3Q8N9I9 347 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 OR52M1Q8NGK5 317 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 OR4K15Q8NH41 348 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 CAPSLQ8WWF8 208 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 ARL11Q969Q4 196 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 MRPS24Q96EL2 167 aaKnown RBP10.34□□□□□ -0.75
NPAS3-209ENST00000551008 GFI1Q99684 422 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 SELENOIQ9C0D9 397 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 DUSP21Q9H596 190 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 ERGIC3Q9Y282 383 aa10.34□□□□□ -0.75
NPAS3-209ENST00000551008 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
NPAS3-209ENST00000551008 AIPO00170 330 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 ORC5O43913 435 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 GZMHP20718 246 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 MYF6P23409 242 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 REG1BP48304 166 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 ZNF134P52741 427 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 QRFPP83859 136 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 GABPB1Q06547 395 aaPredicted RBP10.33□□□□□ -0.76
NPAS3-209ENST00000551008 GPR176Q14439 515 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 SPHARQ15513 63 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 C1orf100Q5SVJ3 147 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 OR10K2Q6IF99 312 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 CCDC144NLQ6NUI1 221 aa10.33□□□□□ -0.76
NPAS3-209ENST00000551008 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms