RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TRAPPC6BQ86SZ2 158 aa10.67□□□□□ -0.7
RAB5C-206ENST00000550406 UBALD1Q8TB05 177 aa10.67□□□□□ -0.7
RAB5C-206ENST00000550406 SIRT7Q9NRC8 400 aa10.67□□□□□ -0.7
RAB5C-206ENST00000550406 SOX21Q9Y651 276 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-206ENST00000550406 FN1P02751 2386 aaKnown RBP10.67□□□□□ -0.7
RAB5C-206ENST00000550406 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 KBTBD11-OT1A0A1B0GTJ5 212 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 TMEM235A6NFC5 223 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 A6NJ64 397 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 C12orf77C9JDV5 145 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 RNASEK-C17orf49H0YIS7 233 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 XRCC3O43542 346 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 SSX5O60225 188 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 RBP4P02753 201 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 IGHV1-8P0DP01 117 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 HOXB4P17483 251 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-206ENST00000550406 OMGP23515 440 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 SSTR5P35346 364 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 SOX6P35712 828 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 PRAMEF5Q5TYX0 476 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 FAM53AQ6NSI3 398 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-206ENST00000550406 HEPN1Q6WQI6 88 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 ZNF565Q8N9K5 539 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 RFESDQ8TAC1 157 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 AP3S1Q92572 193 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 LHX4Q969G2 390 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 S100A16Q96FQ6 103 aaKnown RBP10.66□□□□□ -0.7
RAB5C-206ENST00000550406 CMSS1Q9BQ75 279 aaKnown RBP10.66□□□□□ -0.7
RAB5C-206ENST00000550406 DIABLOQ9NR28 239 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 CALYQ9NYX4 217 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 TRAPPC2LQ9UL33 140 aa10.66□□□□□ -0.7
RAB5C-206ENST00000550406 SONP18583 2426 aaKnown RBP10.66□□□□□ -0.7
RAB5C-206ENST00000550406 A0A1W2PPH5 198 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 ORC5O43913 435 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 SCGNO76038 276 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 HLA-DQB1P01920 261 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 MELTFP08582 738 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 GSTP1P09211 210 aaKnown RBP10.65□□□□□ -0.7
RAB5C-206ENST00000550406 GZMHP20718 246 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 MADCAM1Q13477 382 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 HACD4Q5VWC8 232 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 ZNF782Q6ZMW2 699 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-206ENST00000550406 LAX1Q8IWV1 398 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 PDZD9Q8IXQ8 264 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 PNKDQ8N490 385 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 OR1L1Q8NH94 360 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 RIMS4Q9H426 269 aaPredicted RBP10.65□□□□□ -0.7
RAB5C-206ENST00000550406 AUNIPQ9H7T9 357 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 METTL8Q9H825 291 aaKnown RBP10.65□□□□□ -0.7
RAB5C-206ENST00000550406 Q9N2K0 584 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 IDI2-AS1Q9NZ38 188 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.7
RAB5C-206ENST00000550406 TEP1Q99973 2627 aaKnown RBP10.65□□□□□ -0.71
RAB5C-206ENST00000550406 HIVEP2P31629 2446 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 IGKV1D-8A0A087WSZ0 117 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 SERPINE3A8MV23 424 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 CLPXO76031 633 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 CD3GP09693 182 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 LOXL3P58215 753 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 TAS2R20P59543 309 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 HMGN3Q15651 99 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 PNLIPRP3Q17RR3 467 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 BCL6BQ8N143 479 aaPredicted RBP10.64□□□□□ -0.71
RAB5C-206ENST00000550406 MCFD2Q8NI22 146 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 NUDCD2Q8WVJ2 157 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 MAFIPQ8WZ33 124 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 ARL11Q969Q4 196 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 KIRREL1Q96J84 757 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 TAF9BQ9HBM6 251 aa10.64□□□□□ -0.71
RAB5C-206ENST00000550406 ZNF230Q9UIE0 474 aaPredicted RBP10.64□□□□□ -0.71
RAB5C-206ENST00000550406 ZFHX3Q15911 3703 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 A0A1W2PRD5 423 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 A0A1W2PRF3 423 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 A0A1W2PRM7 423 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 MEIOCA2RUB1 952 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 FAM172BPA6NC97 362 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 FAM25AB3EWG3 89 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 FAM25CB3EWG5 89 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 FAM25GB3EWG6 89 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 F2RL2O00254 374 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 CRLF1O75462 422 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 HBZP02008 142 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 FCGR3AP08637 254 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 ARFRP1Q13795 201 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 LTC4SQ16873 150 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 LDLRAD2Q5SZI1 272 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 C6orf183Q5T699 404 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
RAB5C-206ENST00000550406 SETD6Q8TBK2 473 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms